RNA–Protein interactions for RNA: ENST00000531555.5

TRIM29-217, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-217ENST00000531555 PCDHB6Q9Y5E3 794 aa9.37□□□□□ -0.91
TRIM29-217ENST00000531555 MYH9P35579 1960 aaKnown RBP9.37□□□□□ -0.91
TRIM29-217ENST00000531555 ADCY6O43306 1168 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 CNGA1P29973 690 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 CIITAP33076 1130 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 MCM7P33993 719 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 USP11P51784 963 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 NUCB2P80303 420 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 CEBPZQ03701 1054 aaKnown RBP9.36□□□□□ -0.91
TRIM29-217ENST00000531555 MTMR1Q13613 665 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 CCDC144BQ3MJ40 725 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 MAP3K21Q5TCX8 1036 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 XRRA1Q6P2D8 792 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 POTEHQ6S545 545 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 NLRX1Q86UT6 975 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 COPS5Q92905 334 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 LENG9Q96B70 501 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 INPP4AQ96PE3 977 aaPredicted RBP9.36□□□□□ -0.91
TRIM29-217ENST00000531555 ABHD16BQ9H3Z7 469 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 ZSCAN16Q9H4T2 348 aaPredicted RBP9.36□□□□□ -0.91
TRIM29-217ENST00000531555 BCAS3Q9H6U6 928 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 DDX25Q9UHL0 483 aaKnown RBP9.36□□□□□ -0.91
TRIM29-217ENST00000531555 CLIC4Q9Y696 253 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 MRVI1Q9Y6F6 885 aa9.36□□□□□ -0.91
TRIM29-217ENST00000531555 CYP3A7-CYP3A51PA0A087WV96 503 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 SPATA31C2B4DYI2 1134 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 MEIS1O00470 390 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 MSH4O15457 936 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 FIBPO43427 364 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 NEMFO60524 1076 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 ATP9AO75110 1047 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 STAM2O75886 525 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 PDIA4P13667 645 aaKnown RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 SMPD1P17405 629 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 UBA1P22314 1058 aaKnown RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 CYP3A7P24462 503 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 TRAPPC10P48553 1259 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 SETQ01105 290 aaPredicted RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 SP2Q02086 613 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 DNM1Q05193 864 aaKnown RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 MTFR1Q15390 333 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 PKN2Q16513 984 aaKnown RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 LY6KQ17RY6 165 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 GNPTABQ3T906 1256 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 Q4G0T1 1027 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 RILPL1Q5EBL4 403 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 MOXD1Q6UVY6 613 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 SCFD2Q8WU76 684 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 GPRASP2Q96D09 838 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 MBOAT7Q96N66 472 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 USP28Q96RU2 1077 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 ZNF577Q9BSK1 485 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 MCOLN1Q9GZU1 580 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 UNC93B1Q9H1C4 597 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 TMEM60Q9H2L4 133 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 AGO4Q9HCK5 861 aaKnown RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 KCNH7Q9NS40 1196 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
TRIM29-217ENST00000531555 TFIP11Q9UBB9 837 aaKnown RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 CIZ1Q9ULV3 898 aaPredicted RBP9.35□□□□□ -0.91
TRIM29-217ENST00000531555 RBM47A0AV96 593 aaKnown RBP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 DDX39AO00148 427 aaKnown RBP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 TXNP10599 105 aaKnown RBP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 AKR1A1P14550 325 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 GCFC2P16383 781 aaKnown RBP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 KCNA2P16389 499 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 ICAM3P32942 547 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 TNFAIP2Q03169 654 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 ITGB3BPQ13352 177 aaPredicted RBP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 TTLL4Q14679 1199 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 SF3A1Q15459 793 aaKnown RBP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 CALCRLQ16602 461 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 PPP4R3AQ6IN85 833 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 CCDC62Q6P9F0 684 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 NIPA1Q7RTP0 329 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 ETNPPLQ8TBG4 499 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 NAP1L4Q99733 375 aaKnown RBP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
TRIM29-217ENST00000531555 FAM184BQ9ULE4 1060 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 TELO2Q9Y4R8 837 aa9.34□□□□□ -0.91
TRIM29-217ENST00000531555 IPO5O00410 1097 aaKnown RBP9.33□□□□□ -0.92
TRIM29-217ENST00000531555 SEPT4O43236 478 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 MARCH6O60337 910 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 GGPS1O95749 300 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 OR52Z1P0C646 297 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 CCL5P13501 91 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 NCLP19338 710 aaKnown RBP9.33□□□□□ -0.92
TRIM29-217ENST00000531555 IRX5P78411 483 aaPredicted RBP9.33□□□□□ -0.92
TRIM29-217ENST00000531555 SP4Q02446 784 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 PTGDRQ13258 359 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 DUSP28Q4G0W2 176 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 IQSEC1Q6DN90 963 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 CYFIP1Q7L576 1253 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 TLK2Q86UE8 772 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 C4orf32Q8N8J7 132 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 OR6J1Q8NGC5 347 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 HAS1Q92839 578 aa9.33□□□□□ -0.92
TRIM29-217ENST00000531555 ZNF333Q96JL9 665 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms