RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CYTH3O43739 400 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 SORBS3O60504 671 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 PARNO95453 639 aaKnown RBP14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 GGPS1O95749 300 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 CXCL10P02778 98 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 CKBP12277 381 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 POU3F3P20264 500 aaPredicted RBP14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 CCND2P30279 289 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 KCNJ6P48051 423 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 WDR5P61964 334 aaKnown RBP14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 SP2Q02086 613 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 TROAPQ12815 778 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 PTK7Q13308 1070 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 WTAPQ15007 396 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 TRIM71Q2Q1W2 868 aaKnown RBP14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 HSDL1Q3SXM5 330 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 RALYLQ86SE5 291 aaKnown RBP14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 TSPYL2Q9H2G4 693 aaPredicted RBP14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 MTCH2Q9Y6C9 303 aa14.85□□□□□ -0.03
TM9SF1-211ENST00000531406 PNMA6FA0A0J9YX94 578 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 EPOPA6NHQ4 379 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 TLL1O43897 1013 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 NBNO60934 754 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 TGFB3P10600 412 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 UBA1P22314 1058 aaKnown RBP14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 ZNF200P98182 395 aaPredicted RBP14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 CNKSR3Q6P9H4 555 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 TRAF7Q6Q0C0 670 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 FCHSD1Q86WN1 690 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 NCOA7Q8NI08 942 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 ADAMTS19Q8TE59 1207 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 ARNTL2Q8WYA1 636 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 WNT8BQ93098 351 aa14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 ZFP91Q96JP5 570 aaPredicted RBP14.84□□□□□ -0.03
TM9SF1-211ENST00000531406 SGSM2O43147 1006 aa14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 GTPBP6O43824 516 aaPredicted RBP14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 ANTXR2P58335 489 aa14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 HIC1Q14526 733 aa14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 TCTN1Q2MV58 587 aa14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 ZNF618Q5T7W0 954 aa14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 TMCO2Q7Z6W1 182 aaPredicted RBP14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 CATIPQ7Z7H3 387 aa14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 GPKOWQ92917 476 aaPredicted RBP eCLIP14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 CCDC136Q96JN2 1154 aa14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 C16orf70Q9BSU1 422 aa14.83□□□□□ -0.04
TM9SF1-211ENST00000531406 ABHD14A-ACY1A0A1B0GW23 586 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 DEFB103AP81534 67 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 MBTPS1Q14703 1052 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 KRT40Q6A162 431 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 SPRED2Q7Z698 418 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 IL27Q8NEV9 243 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 IGDCC4Q8TDY8 1250 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 PIBF1Q8WXW3 757 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 MAP4K1Q92918 833 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 ZBED2Q9BTP6 218 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 BCAS3Q9H6U6 928 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 MLXIPQ9HAP2 919 aa14.82□□□□□ -0.04
TM9SF1-211ENST00000531406 LCHNA4D1U4 455 aa14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 MRPS9P82933 396 aaKnown RBP14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 GRB10Q13322 594 aa14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 IKBKEQ14164 716 aa14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 SKIV2LQ15477 1246 aaKnown RBP14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 SERINC5Q86VE9 423 aa14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 MB21D2Q8IYB1 491 aaPredicted RBP14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 UHRF1Q96T88 793 aaPredicted RBP14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 FRMPD4Q14CM0 1322 aa14.81□□□□□ -0.04
TM9SF1-211ENST00000531406 C17orf102A2RUQ5 167 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 SPATA31C2B4DYI2 1134 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 RBAK-RBAKDNI3L0D1 243 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 EFCAB14O75071 495 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 STAM2O75886 525 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 GJB5O95377 273 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 BMP1P13497 986 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 ICAM3P32942 547 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 TFF2Q03403 129 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 GNPTABQ3T906 1256 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 INPP4AQ96PE3 977 aaPredicted RBP14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 MAP3K14Q99558 947 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 RAD9AQ99638 391 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 RBM8AQ9Y5S9 174 aaKnown RBP14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 TRANK1O15050 2925 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 SCN5AQ14524 2016 aa14.8□□□□□ -0.04
TM9SF1-211ENST00000531406 RSPH10B2B2RC85 870 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 H3BRB1 525 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 LPXNO60711 386 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 LGR5O75473 907 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 RSPH10BP0C881 870 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 HOXC8P31273 242 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 THPOP40225 353 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 SEMA3FQ13275 785 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 AAK1Q2M2I8 961 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 ZNF654Q8IZM8 581 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 RRP36Q96EU6 259 aaKnown RBP14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 SPZ1Q9BXG8 430 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 TANC1Q9C0D5 1861 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 TUT1Q9H6E5 874 aaKnown RBP14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 LY9Q9HBG7 655 aa14.79□□□□□ -0.04
TM9SF1-211ENST00000531406 GBF1Q92538 1859 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms