RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 PHOSPHO2Q8TCD6 241 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 KAT2BQ92831 832 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 FAM122AQ96E09 287 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 COL20A1Q9P218 1284 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 ADD3Q9UEY8 706 aaKnown RBP10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 MYH6P13533 1939 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 ATG2AQ2TAZ0 1938 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 A0A0D9SFI3 127 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 FGAP02671 866 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 TXNP10599 105 aaKnown RBP10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 TOP1P11387 765 aaKnown RBP10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 RFC2P35250 354 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 MLLT3P42568 568 aaPredicted RBP10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 CHMP4BP1P59074 171 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 PDE4DQ08499 809 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 HIC1Q14526 733 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 PPP2R5BQ15173 497 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 TSR1Q2NL82 804 aaKnown RBP10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 RRP12Q5JTH9 1297 aaKnown RBP10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 CCDC62Q6P9F0 684 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 GDPD5Q8WTR4 605 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 WNT8BQ93098 351 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 FAM227BQ96M60 508 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 C1QTNF1Q9BXJ1 281 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 FTOQ9C0B1 505 aaKnown RBP eCLIP10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 LAMA4Q16363 1823 aa10.02□□□□□ -0.81
TGFBR3-208ENST00000529608 NCOR1O75376 2440 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 LOC102724159A0A0B4J2E5 919 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 FAM86C2PA6NEL3 165 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 NBNO60934 754 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 GOLGA8HP0CJ92 632 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 SNHG28P0DPA3 235 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 ACTN1P12814 892 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 MX1P20591 662 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 HAND2P61296 217 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 PTPN11Q06124 597 aaPredicted RBP10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 ARHGAP1Q07960 439 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 ZNF543Q08ER8 600 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 PWP2Q15269 919 aaKnown RBP10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 PTGISQ16647 500 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 LY6KQ17RY6 165 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 AAK1Q2M2I8 961 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 USH1GQ495M9 461 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 TRAF7Q6Q0C0 670 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 SCFD2Q8WU76 684 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 AFG1LQ8WV93 481 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 HLA-CQ95604 372 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 TAAR1Q96RJ0 339 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 TCP11L1Q9NUJ3 509 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 COG5Q9UP83 839 aa10.01□□□□□ -0.81
TGFBR3-208ENST00000529608 NKRFO15226 690 aaKnown RBP eCLIP10□□□□□ -0.81
TGFBR3-208ENST00000529608 MAP3K7O43318 606 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 EIF5BO60841 1220 aaKnown RBP10□□□□□ -0.81
TGFBR3-208ENST00000529608 MMP3P08254 477 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 MBTPS1Q14703 1052 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 ALX1Q15699 326 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 LRRFIP1Q32MZ4 808 aaKnown RBP10□□□□□ -0.81
TGFBR3-208ENST00000529608 CHD1LQ86WJ1 897 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 TBC1D10CQ8IV04 446 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 DNERQ8NFT8 737 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 ZKSCAN3Q9BRR0 538 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 OSBPL7Q9BZF2 842 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 UBA5Q9GZZ9 404 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 SUGCTQ9HAC7 445 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 TOMM22Q9NS69 142 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
TGFBR3-208ENST00000529608 MTUS1Q9ULD2 1270 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 MICAL3Q7RTP6 2002 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 WDR19Q8NEZ3 1342 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 NLRC5Q86WI3 1866 aa10□□□□□ -0.81
TGFBR3-208ENST00000529608 BAIAP3O94812 1187 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 CXCL10P02778 98 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 HSPD1P10809 573 aaKnown RBP9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 CKBP12277 381 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 ZNF200P98182 395 aaPredicted RBP9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 BFSP2Q13515 415 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 TRIM71Q2Q1W2 868 aaKnown RBP9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 SEPT14Q6ZU15 432 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 LRRC8DQ7L1W4 858 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 CHST3Q7LGC8 479 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 SESTD1Q86VW0 696 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 SYTL5Q8TDW5 730 aaPredicted RBP9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 AFAP1L1Q8TED9 768 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 RNF166Q96A37 237 aaPredicted RBP9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 HDAC6Q9UBN7 1215 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 DOCK5Q9H7D0 1870 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 NEDD4P46934 1319 aa9.99□□□□□ -0.81
TGFBR3-208ENST00000529608 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 LINC01553A4QN01 128 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 KIF28PB7ZC32 967 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 KPNA6O60684 536 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 GJB5O95377 273 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 SELPP16109 830 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 RBL2Q08999 1139 aa9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 NMIQ13287 307 aaPredicted RBP9.98□□□□□ -0.81
TGFBR3-208ENST00000529608 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms