RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 DBF4BQ8NFT6 615 aa15.74■□□□□ 0.11
HIF3A-212ENST00000529205 YME1L1Q96TA2 773 aa15.74■□□□□ 0.11
HIF3A-212ENST00000529205 CPVLQ9H3G5 476 aa15.74■□□□□ 0.11
HIF3A-212ENST00000529205 PXMP2Q9NR77 195 aa15.74■□□□□ 0.11
HIF3A-212ENST00000529205 MAP3K20Q9NYL2 800 aaKnown RBP15.74■□□□□ 0.11
HIF3A-212ENST00000529205 CCDC171Q6TFL3 1326 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 A0A0D9SFI3 127 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 PARP1P09874 1014 aaKnown RBP15.73■□□□□ 0.11
HIF3A-212ENST00000529205 MYCLP12524 364 aaPredicted RBP15.73■□□□□ 0.11
HIF3A-212ENST00000529205 HTRA4P83105 476 aaPredicted RBP15.73■□□□□ 0.11
HIF3A-212ENST00000529205 TCTN1Q2MV58 587 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 TRIM71Q2Q1W2 868 aaKnown RBP15.73■□□□□ 0.11
HIF3A-212ENST00000529205 QRICH1Q2TAL8 776 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 BANK1Q8NDB2 785 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 SEPT8Q92599 483 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 SPATA33Q96N06 139 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 AMNQ9BXJ7 453 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 VAT1LQ9HCJ6 419 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 COL20A1Q9P218 1284 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 PCDHB15Q9Y5E8 787 aa15.73■□□□□ 0.11
HIF3A-212ENST00000529205 TRIP12Q14669 1992 aaPredicted RBP15.73■□□□□ 0.11
HIF3A-212ENST00000529205 SALL3Q9BXA9 1300 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 C17orf102A2RUQ5 167 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 TRIM6-TRIM34B2RNG4 842 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 TGFB3P10600 412 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 PDE1AP54750 535 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 ZNF200P98182 395 aaPredicted RBP15.72■□□□□ 0.11
HIF3A-212ENST00000529205 NMIQ13287 307 aaPredicted RBP15.72■□□□□ 0.11
HIF3A-212ENST00000529205 GPM6BQ13491 265 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 EPC2Q52LR7 807 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 MYSM1Q5VVJ2 828 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 SAMD3Q8N6K7 520 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 NEK9Q8TD19 979 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
HIF3A-212ENST00000529205 ATP6V0A1Q93050 837 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 UPF3BQ9BZI7 483 aaKnown RBP15.72■□□□□ 0.11
HIF3A-212ENST00000529205 KCNH6Q9H252 994 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 MLXIPQ9HAP2 919 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 PRKAG3Q9UGI9 489 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 PTPRSQ13332 1948 aa15.72■□□□□ 0.11
HIF3A-212ENST00000529205 TET1Q8NFU7 2136 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 BDP1A6H8Y1 2624 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 NCOR1O75376 2440 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 H3BNC9 293 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 DCXO43602 365 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 NCK2O43639 380 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 CAND2O75155 1236 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 KDM4AO75164 1064 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 GGPS1O95749 300 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 GNAT1P11488 350 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 TRAF1Q13077 416 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 PLEKHG4Q58EX7 1191 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 CELF3Q5SZQ8 465 aaKnown RBP15.71■□□□□ 0.11
HIF3A-212ENST00000529205 TRAF7Q6Q0C0 670 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 ZNF589Q86UQ0 364 aaPredicted RBP15.71■□□□□ 0.11
HIF3A-212ENST00000529205 SERINC5Q86VE9 423 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 TBC1D10CQ8IV04 446 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 TOP1MTQ969P6 601 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 RILPL2Q969X0 211 aa15.71■□□□□ 0.11
HIF3A-212ENST00000529205 PABPC5Q96DU9 382 aaKnown RBP15.71■□□□□ 0.11
HIF3A-212ENST00000529205 ZSCAN10Q96SZ4 725 aaPredicted RBP15.71■□□□□ 0.11
HIF3A-212ENST00000529205 NSUN3Q9H649 340 aaKnown RBP15.71■□□□□ 0.11
HIF3A-212ENST00000529205 SIP14410 1827 aa15.71■□□□□ 0.1
HIF3A-212ENST00000529205 H3BQ06 376 aaPredicted RBP15.7■□□□□ 0.1
HIF3A-212ENST00000529205 UPP2O95045 317 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 HOXD8P13378 290 aaPredicted RBP15.7■□□□□ 0.1
HIF3A-212ENST00000529205 HSD17B4P51659 736 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 MBTPS1Q14703 1052 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 HSDL1Q3SXM5 330 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 TMEM192Q8IY95 271 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 ANKS1AQ92625 1134 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 APBB2Q92870 758 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 WNT8BQ93098 351 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 PDCD2LQ9BRP1 358 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 JMJD4Q9H9V9 463 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 REV3LO60673 3130 aa15.7■□□□□ 0.1
HIF3A-212ENST00000529205 NEDD4P46934 1319 aa15.69■□□□□ 0.1
HIF3A-212ENST00000529205 H3BRB1 525 aa15.69■□□□□ 0.1
HIF3A-212ENST00000529205 NOP56O00567 594 aaKnown RBP15.69■□□□□ 0.1
HIF3A-212ENST00000529205 SORBS3O60504 671 aa15.69■□□□□ 0.1
HIF3A-212ENST00000529205 TCEAL5Q5H9L2 206 aa15.69■□□□□ 0.1
HIF3A-212ENST00000529205 UBAC1Q9BSL1 405 aa15.69■□□□□ 0.1
HIF3A-212ENST00000529205 TUT1Q9H6E5 874 aaKnown RBP15.69■□□□□ 0.1
HIF3A-212ENST00000529205 TRANK1O15050 2925 aa15.69■□□□□ 0.1
HIF3A-212ENST00000529205 CCND2P30279 289 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 PGM5Q15124 567 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 STOX1Q6ZVD7 989 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 VSIG10LQ86VR7 867 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 FIBCD1Q8N539 461 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 POP1Q99575 1024 aaKnown RBP15.68■□□□□ 0.1
HIF3A-212ENST00000529205 C16orf70Q9BSU1 422 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 USP26Q9BXU7 913 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 IFIH1Q9BYX4 1025 aaKnown RBP15.68■□□□□ 0.1
HIF3A-212ENST00000529205 KRT23Q9C075 422 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 CLDND1Q9NY35 253 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 RWDD3Q9Y3V2 267 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 PCDHA1Q9Y5I3 950 aa15.68■□□□□ 0.1
HIF3A-212ENST00000529205 KIAA1217Q5T5P2 1943 aa15.67■□□□□ 0.1
HIF3A-212ENST00000529205 POTEB3A0JP26 581 aa15.67■□□□□ 0.1
HIF3A-212ENST00000529205 B4E1Z4 1266 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms