RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 GPNMBQ14956 572 aa29.95■■■□□ 2.39
TRIM3-206ENST00000528227 CCDC85BQ15834 202 aaPredicted RBP29.95■■■□□ 2.39
TRIM3-206ENST00000528227 LRRC8DQ7L1W4 858 aa29.95■■■□□ 2.39
TRIM3-206ENST00000528227 FCHSD1Q86WN1 690 aa29.95■■■□□ 2.39
TRIM3-206ENST00000528227 BAZ2BQ9UIF8 2168 aaKnown RBP29.95■■■□□ 2.38
TRIM3-206ENST00000528227 SORBS3O60504 671 aa29.94■■■□□ 2.38
TRIM3-206ENST00000528227 PPFIA4O75335 1185 aa29.94■■■□□ 2.38
TRIM3-206ENST00000528227 GGPS1O95749 300 aa29.94■■■□□ 2.38
TRIM3-206ENST00000528227 TGFB3P10600 412 aa29.94■■■□□ 2.38
TRIM3-206ENST00000528227 HSDL1Q3SXM5 330 aa29.94■■■□□ 2.38
TRIM3-206ENST00000528227 ZFP91Q96JP5 570 aaPredicted RBP29.94■■■□□ 2.38
TRIM3-206ENST00000528227 SPATA33Q96N06 139 aa29.94■■■□□ 2.38
TRIM3-206ENST00000528227 RBM8AQ9Y5S9 174 aaKnown RBP29.94■■■□□ 2.38
TRIM3-206ENST00000528227 CKBP12277 381 aa29.93■■■□□ 2.38
TRIM3-206ENST00000528227 UBA1P22314 1058 aaKnown RBP29.93■■■□□ 2.38
TRIM3-206ENST00000528227 HERC6Q8IVU3 1022 aa29.93■■■□□ 2.38
TRIM3-206ENST00000528227 THEGQ9P2T0 379 aa29.93■■■□□ 2.38
TRIM3-206ENST00000528227 PARNO95453 639 aaKnown RBP29.92■■■□□ 2.38
TRIM3-206ENST00000528227 PTK7Q13308 1070 aa29.92■■■□□ 2.38
TRIM3-206ENST00000528227 ATXN2LQ8WWM7 1075 aaKnown RBP29.92■■■□□ 2.38
TRIM3-206ENST00000528227 GPKOWQ92917 476 aaPredicted RBP eCLIP29.92■■■□□ 2.38
TRIM3-206ENST00000528227 PTPRSQ13332 1948 aa29.92■■■□□ 2.38
TRIM3-206ENST00000528227 FRMPD4Q14CM0 1322 aa29.92■■■□□ 2.38
TRIM3-206ENST00000528227 MAP3K14Q99558 947 aa29.91■■■□□ 2.38
TRIM3-206ENST00000528227 LY9Q9HBG7 655 aa29.91■■■□□ 2.38
TRIM3-206ENST00000528227 NBNO60934 754 aa29.9■■■□□ 2.38
TRIM3-206ENST00000528227 CXCL10P02778 98 aa29.9■■■□□ 2.38
TRIM3-206ENST00000528227 TRIM71Q2Q1W2 868 aaKnown RBP29.9■■■□□ 2.38
TRIM3-206ENST00000528227 PIBF1Q8WXW3 757 aa29.9■■■□□ 2.38
TRIM3-206ENST00000528227 C16orf70Q9BSU1 422 aa29.9■■■□□ 2.38
TRIM3-206ENST00000528227 KIF28PB7ZC32 967 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 DDAH1O94760 285 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 KCNJ6P48051 423 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 WDR5P61964 334 aaKnown RBP29.89■■■□□ 2.38
TRIM3-206ENST00000528227 ZNF200P98182 395 aaPredicted RBP29.89■■■□□ 2.38
TRIM3-206ENST00000528227 HIC1Q14526 733 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 CNKSR3Q6P9H4 555 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 ZNF654Q8IZM8 581 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 WNT8BQ93098 351 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 MYL10Q9BUA6 226 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 SPZ1Q9BXG8 430 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 MLXIPQ9HAP2 919 aa29.89■■■□□ 2.38
TRIM3-206ENST00000528227 ARHGEF15O94989 841 aa29.88■■■□□ 2.37
TRIM3-206ENST00000528227 MRPS9P82933 396 aaKnown RBP29.88■■■□□ 2.37
TRIM3-206ENST00000528227 TAP1Q03518 808 aa29.88■■■□□ 2.37
TRIM3-206ENST00000528227 TRAF7Q6Q0C0 670 aa29.88■■■□□ 2.37
TRIM3-206ENST00000528227 CTCFLQ8NI51 663 aaPredicted RBP29.88■■■□□ 2.37
TRIM3-206ENST00000528227 MTA3Q9BTC8 594 aa29.88■■■□□ 2.37
TRIM3-206ENST00000528227 CERS4Q9HA82 394 aa29.88■■■□□ 2.37
TRIM3-206ENST00000528227 RFXAPO00287 272 aa29.87■■■□□ 2.37
TRIM3-206ENST00000528227 STAM2O75886 525 aa29.87■■■□□ 2.37
TRIM3-206ENST00000528227 KIF5BP33176 963 aa29.87■■■□□ 2.37
TRIM3-206ENST00000528227 GNPTABQ3T906 1256 aa29.87■■■□□ 2.37
TRIM3-206ENST00000528227 CASC1Q6TDU7 716 aa29.87■■■□□ 2.37
TRIM3-206ENST00000528227 INPP4AQ96PE3 977 aaPredicted RBP29.87■■■□□ 2.37
TRIM3-206ENST00000528227 ASB2Q96Q27 587 aa29.87■■■□□ 2.37
TRIM3-206ENST00000528227 BCAS3Q9H6U6 928 aa29.87■■■□□ 2.37
TRIM3-206ENST00000528227 EPOPA6NHQ4 379 aa29.86■■■□□ 2.37
TRIM3-206ENST00000528227 PRC1O43663 620 aa29.86■■■□□ 2.37
TRIM3-206ENST00000528227 SMARCA1P28370 1054 aa29.86■■■□□ 2.37
TRIM3-206ENST00000528227 ICAM3P32942 547 aa29.86■■■□□ 2.37
TRIM3-206ENST00000528227 TCTN1Q2MV58 587 aa29.86■■■□□ 2.37
TRIM3-206ENST00000528227 ZNF618Q5T7W0 954 aa29.86■■■□□ 2.37
TRIM3-206ENST00000528227 RRP36Q96EU6 259 aaKnown RBP29.86■■■□□ 2.37
TRIM3-206ENST00000528227 LSG1Q9H089 658 aaKnown RBP29.86■■■□□ 2.37
TRIM3-206ENST00000528227 TLL1O43897 1013 aa29.85■■■□□ 2.37
TRIM3-206ENST00000528227 POU3F3P20264 500 aaPredicted RBP29.85■■■□□ 2.37
TRIM3-206ENST00000528227 MICALL1Q8N3F8 863 aa29.85■■■□□ 2.37
TRIM3-206ENST00000528227 ABHD14A-ACY1A0A1B0GW23 586 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 SPATA31C2B4DYI2 1134 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 SH2B2O14492 632 aaPredicted RBP29.84■■■□□ 2.37
TRIM3-206ENST00000528227 LGALS2P05162 132 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 MCM5P33992 734 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 DEFB103AP81534 67 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 MRPS5P82675 430 aaKnown RBP29.84■■■□□ 2.37
TRIM3-206ENST00000528227 SEMA3FQ13275 785 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 TMCO2Q7Z6W1 182 aaPredicted RBP29.84■■■□□ 2.37
TRIM3-206ENST00000528227 ARNTL2Q8WYA1 636 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 LZTS2Q9BRK4 669 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 RTEL1Q9NZ71 1219 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 MTCH2Q9Y6C9 303 aa29.84■■■□□ 2.37
TRIM3-206ENST00000528227 H3BRB1 525 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 COL9A3Q14050 684 aaPredicted RBP29.83■■■□□ 2.37
TRIM3-206ENST00000528227 NEDD9Q14511 834 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 MBTPS1Q14703 1052 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 USP17L6PQ6QN14 398 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 SERINC5Q86VE9 423 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 TMTC2Q8N394 836 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 SMARCC2Q8TAQ2 1214 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 CUL5Q93034 780 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 TMEM87BQ96K49 555 aa29.83■■■□□ 2.37
TRIM3-206ENST00000528227 TUT1Q9H6E5 874 aaKnown RBP29.83■■■□□ 2.37
TRIM3-206ENST00000528227 SEC63Q9UGP8 760 aaKnown RBP29.83■■■□□ 2.37
TRIM3-206ENST00000528227 PIK3CDO00329 1044 aa29.82■■■□□ 2.36
TRIM3-206ENST00000528227 NOP56O00567 594 aaKnown RBP29.82■■■□□ 2.36
TRIM3-206ENST00000528227 MEIS2O14770 477 aa29.82■■■□□ 2.36
TRIM3-206ENST00000528227 SLC27A2O14975 620 aa29.82■■■□□ 2.36
TRIM3-206ENST00000528227 FIBPO43427 364 aa29.82■■■□□ 2.36
TRIM3-206ENST00000528227 PLEKHA8P1O95397 391 aa29.82■■■□□ 2.36
TRIM3-206ENST00000528227 HOXC8P31273 242 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms