RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 APOBRQ0VD83 1088 aa24.23■■□□□ 1.47
PKP3-205ENST00000527442 RNF207Q6ZRF8 634 aa24.23■■□□□ 1.47
PKP3-205ENST00000527442 ZNF274Q96GC6 653 aaPredicted RBP24.23■■□□□ 1.47
PKP3-205ENST00000527442 TMX3Q96JJ7 454 aa24.23■■□□□ 1.47
PKP3-205ENST00000527442 TMEM47Q9BQJ4 181 aa24.23■■□□□ 1.47
PKP3-205ENST00000527442 FTOQ9C0B1 505 aaKnown RBP eCLIP24.23■■□□□ 1.47
PKP3-205ENST00000527442 KLF18A0A0U1RQI7 1052 aa24.22■■□□□ 1.47
PKP3-205ENST00000527442 CCDC69A6NI79 296 aa24.22■■□□□ 1.47
PKP3-205ENST00000527442 NKRFO15226 690 aaKnown RBP eCLIP24.22■■□□□ 1.47
PKP3-205ENST00000527442 EDNRBP24530 442 aa24.22■■□□□ 1.47
PKP3-205ENST00000527442 BRDTQ58F21 947 aaPredicted RBP24.22■■□□□ 1.47
PKP3-205ENST00000527442 APOA5Q6Q788 366 aa24.22■■□□□ 1.47
PKP3-205ENST00000527442 RETREG2Q8NC44 543 aa24.22■■□□□ 1.47
PKP3-205ENST00000527442 SCFD2Q8WU76 684 aa24.22■■□□□ 1.47
PKP3-205ENST00000527442 BRPF3Q9ULD4 1205 aa24.22■■□□□ 1.47
PKP3-205ENST00000527442 COG5Q9UP83 839 aa24.22■■□□□ 1.47
PKP3-205ENST00000527442 LARGE1O95461 756 aa24.21■■□□□ 1.47
PKP3-205ENST00000527442 TOP1P11387 765 aaKnown RBP24.21■■□□□ 1.47
PKP3-205ENST00000527442 RPS6P62753 249 aaKnown RBP24.21■■□□□ 1.47
PKP3-205ENST00000527442 PTPN11Q06124 597 aaPredicted RBP24.21■■□□□ 1.47
PKP3-205ENST00000527442 GRB10Q13322 594 aa24.21■■□□□ 1.47
PKP3-205ENST00000527442 ME3Q16798 604 aa24.21■■□□□ 1.47
PKP3-205ENST00000527442 EPHX3Q9H6B9 360 aa24.21■■□□□ 1.47
PKP3-205ENST00000527442 KIAA1217Q5T5P2 1943 aa24.21■■□□□ 1.47
PKP3-205ENST00000527442 TLL1O43897 1013 aa24.2■■□□□ 1.46
PKP3-205ENST00000527442 KPNA6O60684 536 aa24.2■■□□□ 1.46
PKP3-205ENST00000527442 ARIH2O95376 493 aa24.2■■□□□ 1.46
PKP3-205ENST00000527442 TXNP10599 105 aaKnown RBP24.2■■□□□ 1.46
PKP3-205ENST00000527442 BFSP2Q13515 415 aa24.2■■□□□ 1.46
PKP3-205ENST00000527442 NFXL1Q6ZNB6 911 aa24.2■■□□□ 1.46
PKP3-205ENST00000527442 ZNF654Q8IZM8 581 aa24.2■■□□□ 1.46
PKP3-205ENST00000527442 LARP6Q9BRS8 491 aaKnown RBP24.2■■□□□ 1.46
PKP3-205ENST00000527442 NOD1Q9Y239 953 aa24.2■■□□□ 1.46
PKP3-205ENST00000527442 SLC12A7Q9Y666 1083 aa24.2■■□□□ 1.46
PKP3-205ENST00000527442 GOLGA8BA8MQT2 603 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 KIF28PB7ZC32 967 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 LPXNO60711 386 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 PFKFB2O60825 505 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 DDAH1O94760 285 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 PDHBP11177 359 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 PDIA3P30101 505 aaKnown RBP24.19■■□□□ 1.46
PKP3-205ENST00000527442 CHMP4BP1P59074 171 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 CUL4AQ13619 759 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 CTAGE1Q96RT6 745 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 KAT14Q9H8E8 782 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 SIP14410 1827 aa24.19■■□□□ 1.46
PKP3-205ENST00000527442 LCHNA4D1U4 455 aa24.18■■□□□ 1.46
PKP3-205ENST00000527442 BAIAP3O94812 1187 aa24.18■■□□□ 1.46
PKP3-205ENST00000527442 TMCO2Q7Z6W1 182 aaPredicted RBP24.18■■□□□ 1.46
PKP3-205ENST00000527442 DNERQ8NFT8 737 aa24.18■■□□□ 1.46
PKP3-205ENST00000527442 HLA-CQ95604 372 aa24.18■■□□□ 1.46
PKP3-205ENST00000527442 GTF3C6Q969F1 213 aa24.18■■□□□ 1.46
PKP3-205ENST00000527442 MPHOSPH6Q99547 160 aaKnown RBP24.18■■□□□ 1.46
PKP3-205ENST00000527442 LRFN3Q9BTN0 628 aa24.18■■□□□ 1.46
PKP3-205ENST00000527442 BRWD1Q9NSI6 2320 aa24.18■■□□□ 1.46
PKP3-205ENST00000527442 ZBTB43O43298 467 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 KCNJ6P48051 423 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 WDR5P61964 334 aaKnown RBP24.17■■□□□ 1.46
PKP3-205ENST00000527442 ZNF543Q08ER8 600 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 ST3GAL1Q11201 340 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 TROAPQ12815 778 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 GPNMBQ14956 572 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 PTGISQ16647 500 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 SYNE3Q6ZMZ3 975 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 CATIPQ7Z7H3 387 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 PNMA1Q8ND90 353 aa24.17■■□□□ 1.46
PKP3-205ENST00000527442 IPO9Q96P70 1041 aaKnown RBP24.17■■□□□ 1.46
PKP3-205ENST00000527442 MYH6P13533 1939 aa24.16■■□□□ 1.46
PKP3-205ENST00000527442 CALM1P0DP23 149 aa24.16■■□□□ 1.46
PKP3-205ENST00000527442 CALM2P0DP24 149 aa24.16■■□□□ 1.46
PKP3-205ENST00000527442 CALM3P0DP25 149 aa24.16■■□□□ 1.46
PKP3-205ENST00000527442 GDF6Q6KF10 455 aaPredicted RBP24.16■■□□□ 1.46
PKP3-205ENST00000527442 AFAP1L1Q8TED9 768 aa24.16■■□□□ 1.46
PKP3-205ENST00000527442 GDPD5Q8WTR4 605 aa24.16■■□□□ 1.46
PKP3-205ENST00000527442 KHSRPQ92945 711 aaKnown RBP eCLIP24.16■■□□□ 1.46
PKP3-205ENST00000527442 MAP3K14Q99558 947 aa24.16■■□□□ 1.46
PKP3-205ENST00000527442 SLKQ9H2G2 1235 aaPredicted RBP24.16■■□□□ 1.46
PKP3-205ENST00000527442 PNMA2Q9UL42 364 aa24.16■■□□□ 1.46
PKP3-205ENST00000527442 RBAK-RBAKDNI3L0D1 243 aa24.15■■□□□ 1.46
PKP3-205ENST00000527442 DEFB103AP81534 67 aa24.15■■□□□ 1.46
PKP3-205ENST00000527442 USH1GQ495M9 461 aa24.15■■□□□ 1.46
PKP3-205ENST00000527442 CCDC62Q6P9F0 684 aa24.15■■□□□ 1.46
PKP3-205ENST00000527442 MICU3Q86XE3 530 aa24.15■■□□□ 1.46
PKP3-205ENST00000527442 CAGE1Q8TC20 777 aa24.15■■□□□ 1.46
PKP3-205ENST00000527442 AFG1LQ8WV93 481 aa24.15■■□□□ 1.46
PKP3-205ENST00000527442 DHX38Q92620 1227 aaKnown RBP24.15■■□□□ 1.46
PKP3-205ENST00000527442 GOLGA8AA7E2F4 631 aa24.14■■□□□ 1.45
PKP3-205ENST00000527442 MMP3P08254 477 aa24.14■■□□□ 1.45
PKP3-205ENST00000527442 SNHG28P0DPA3 235 aa24.14■■□□□ 1.45
PKP3-205ENST00000527442 HOXD11P31277 338 aaPredicted RBP24.14■■□□□ 1.45
PKP3-205ENST00000527442 METAP2P50579 478 aaKnown RBP eCLIP24.14■■□□□ 1.459e-6■□□□□ 8.1
PKP3-205ENST00000527442 SCRN1Q12765 414 aa24.14■■□□□ 1.45
PKP3-205ENST00000527442 TCTN1Q2MV58 587 aa24.14■■□□□ 1.45
PKP3-205ENST00000527442 CCDC155Q8N6L0 562 aa24.14■■□□□ 1.45
PKP3-205ENST00000527442 INTS4Q96HW7 963 aaKnown RBP24.14■■□□□ 1.45
PKP3-205ENST00000527442 MYL10Q9BUA6 226 aa24.14■■□□□ 1.45
PKP3-205ENST00000527442 NAP1L2Q9ULW6 460 aaPredicted RBP24.14■■□□□ 1.45
PKP3-205ENST00000527442 ARHGAP1Q07960 439 aa24.13■■□□□ 1.45
PKP3-205ENST00000527442 STK3Q13188 491 aa24.13■■□□□ 1.45
PKP3-205ENST00000527442 LRRC8DQ7L1W4 858 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms