RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ALS2CR12Q96Q35 445 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 LRRC1Q9BTT6 524 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 RIC8AQ9NPQ8 531 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 SMARCAL1Q9NZC9 954 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 EHD2Q9NZN4 543 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 DMGDHQ9UI17 866 aaKnown RBP12.91□□□□□ -0.34
LINC01001-201ENST00000526704 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 C10orf71Q711Q0 1435 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 NCK2O43639 380 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 ATP2B4P23634 1241 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 MAGEA1P43355 309 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 CLK2P49760 499 aaKnown RBP12.91□□□□□ -0.34
LINC01001-201ENST00000526704 GFPT1Q06210 699 aaPredicted RBP12.91□□□□□ -0.34
LINC01001-201ENST00000526704 GABPAQ06546 454 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 PPP4R3AQ6IN85 833 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 PPP1R18Q6NYC8 613 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.91□□□□□ -0.34
LINC01001-201ENST00000526704 PROM2Q8N271 834 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 RPGRQ92834 1020 aaKnown RBP12.91□□□□□ -0.34
LINC01001-201ENST00000526704 HAS1Q92839 578 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 TSG101Q99816 390 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 HINFPQ9BQA5 517 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 GPCPD1Q9NPB8 672 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 GGA1Q9UJY5 639 aa12.91□□□□□ -0.34
LINC01001-201ENST00000526704 RRP15Q9Y3B9 282 aaKnown RBP12.91□□□□□ -0.34
LINC01001-201ENST00000526704 MYO1CO00159 1063 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 TCP1P17987 556 aaKnown RBP12.9□□□□□ -0.34
LINC01001-201ENST00000526704 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.34
LINC01001-201ENST00000526704 SLC1A4P43007 532 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 EIF6P56537 245 aaKnown RBP12.9□□□□□ -0.34
LINC01001-201ENST00000526704 VPS72Q15906 364 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 CCDC70Q6NSX1 233 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 MYOCDQ8IZQ8 938 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 GJA10Q969M2 543 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 MTMR8Q96EF0 704 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 PSMB7Q99436 277 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 FGFBP2Q9BYJ0 223 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 JMJD4Q9H9V9 463 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 DAGLAQ9Y4D2 1042 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 NOL4O94818 638 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 CXCR5P32302 372 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 CRY2Q49AN0 593 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 HAUS3Q68CZ6 603 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.34
LINC01001-201ENST00000526704 ANKRD13CQ8N6S4 541 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 GOLGA6L1Q8N7Z2 621 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 TLR10Q9BXR5 811 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 EDEM3Q9BZQ6 932 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 DDX25Q9UHL0 483 aaKnown RBP12.9□□□□□ -0.34
LINC01001-201ENST00000526704 COL4A3BPQ9Y5P4 624 aa12.9□□□□□ -0.34
LINC01001-201ENST00000526704 PNMA6FA0A0J9YX94 578 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 SSU72P8A0A1W2PR75 194 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 RBAK-RBAKDNI3L0D1 243 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 MRPS25P82663 173 aaKnown RBP12.89□□□□□ -0.35
LINC01001-201ENST00000526704 ZNF543Q08ER8 600 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 TRAPPC3LQ5T215 181 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 CACNA2D4Q7Z3S7 1137 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 SLF2Q8IX21 1173 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 CERKQ8TCT0 537 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 TANGO6Q9C0B7 1094 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 CEP72Q9P209 647 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 GOLGA6BA6NDN3 693 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 TRIM66O15016 1216 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 TLR2O60603 784 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 RASSF7Q02833 373 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 PICALMQ13492 652 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 KLHDC7AQ5VTJ3 777 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 TMC4Q7Z404 712 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
LINC01001-201ENST00000526704 NLRC4Q9NPP4 1024 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 POLLQ9UGP5 575 aa12.89□□□□□ -0.35
LINC01001-201ENST00000526704 BUB1O43683 1085 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC01001-201ENST00000526704 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 FAM26FQ5R3K3 315 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 ARHGAP27Q6ZUM4 889 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 SND1Q7KZF4 910 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC01001-201ENST00000526704 TBC1D22AQ8WUA7 517 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 PANK4Q9NVE7 773 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 TRAF5O00463 557 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 SHOX2O60902 331 aaPredicted RBP12.88□□□□□ -0.35
LINC01001-201ENST00000526704 FKBP3Q00688 224 aaKnown RBP12.88□□□□□ -0.35
LINC01001-201ENST00000526704 SEPT2Q15019 361 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
LINC01001-201ENST00000526704 HYIQ5T013 277 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 TTBK2Q6IQ55 1244 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 TBC1D16Q8TBP0 767 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 CUL5Q93034 780 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 NOX5Q96PH1 765 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 LSM14BQ9BX40 385 aaKnown RBP12.88□□□□□ -0.35
LINC01001-201ENST00000526704 DDX4Q9NQI0 724 aaKnown RBP12.88□□□□□ -0.35
LINC01001-201ENST00000526704 RBM12Q9NTZ6 932 aaKnown RBP12.88□□□□□ -0.35
LINC01001-201ENST00000526704 STIM2Q9P246 746 aa12.88□□□□□ -0.35
LINC01001-201ENST00000526704 PCDHA2Q9Y5H9 948 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms