RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 DGKDQ16760 1214 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 TCTN1Q2MV58 587 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 HSDL1Q3SXM5 330 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 CATIPQ7Z7H3 387 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 VSIG10LQ86VR7 867 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 RAB11FIP4Q86YS3 637 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 DHX37Q8IY37 1157 aaKnown RBP13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 ZNF654Q8IZM8 581 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 PPTC7Q8NI37 304 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 GAS2L1Q99501 681 aaPredicted RBP13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 ESYT1Q9BSJ8 1104 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 GTF2IRD1Q9UHL9 959 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 NOD1Q9Y239 953 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 TRANK1O15050 2925 aa13.69□□□□□ -0.22
CLNS1A-202ENST00000525064 FRMPD4Q14CM0 1322 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 SH2B2O14492 632 aaPredicted RBP13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 HOXD8P13378 290 aaPredicted RBP13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 RFC2P35250 354 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 MRPS9P82933 396 aaKnown RBP13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 SEMA3FQ13275 785 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 BFSP2Q13515 415 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 LAMC2Q13753 1193 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 KIAA0753Q2KHM9 967 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 CELF3Q5SZQ8 465 aaKnown RBP13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 MYSM1Q5VVJ2 828 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 CMTR1Q8N1G2 835 aaKnown RBP13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 SAMD3Q8N6K7 520 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 RETREG2Q8NC44 543 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 SLC28A3Q9HAS3 691 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 TELO2Q9Y4R8 837 aa13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
CLNS1A-202ENST00000525064 TCF20Q9UGU0 1960 aaKnown RBP13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 DDAH1O94760 285 aa13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 CCND2P30279 289 aa13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 TRIM71Q2Q1W2 868 aaKnown RBP13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 PPP2R2DQ66LE6 453 aa13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 TRAF7Q6Q0C0 670 aa13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 SRBD1Q8N5C6 995 aaKnown RBP13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 CAGE1Q8TC20 777 aa13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 SPATA33Q96N06 139 aa13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 SPZ1Q9BXG8 430 aa13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 PCDHA11Q9Y5I1 949 aa13.67□□□□□ -0.22
CLNS1A-202ENST00000525064 EPOPA6NHQ4 379 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 RFXAPO00287 272 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 NBNO60934 754 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 CA3P07451 260 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 CKBP12277 381 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 ACTN1P12814 892 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 IGFBP4P22692 258 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 RBL2Q08999 1139 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 NECTIN1Q15223 517 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 CCDC85BQ15834 202 aaPredicted RBP13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 CREB3L3Q68CJ9 461 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 USP17L6PQ6QN14 398 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 CASC1Q6TDU7 716 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 LRRC8DQ7L1W4 858 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 SPRED2Q7Z698 418 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 TMCO2Q7Z6W1 182 aaPredicted RBP13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 C7orf31Q8N865 590 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 AFAP1L1Q8TED9 768 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 C16orf70Q9BSU1 422 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 KATNAL1Q9BW62 490 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 CERS4Q9HA82 394 aa13.66□□□□□ -0.22
CLNS1A-202ENST00000525064 LOXHD1Q8IVV2 1947 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 hCG_1642624A0A1W2PR95 340 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 MEIS2O14770 477 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 SELPP16109 830 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 DEFB103AP81534 67 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 MBTPS1Q14703 1052 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 KCNV1Q6PIU1 500 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 NFXL1Q6ZNB6 911 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 CCDC155Q8N6L0 562 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 CTCFLQ8NI51 663 aaPredicted RBP13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 SLC9A7Q96T83 725 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 ANO2Q9NQ90 1003 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 RTEL1Q9NZ71 1219 aa13.65□□□□□ -0.22
CLNS1A-202ENST00000525064 MUC3AQ02505 3323 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 CXCL10P02778 98 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 LGALS2P05162 132 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 MCM5P33992 734 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 WDR5P61964 334 aaKnown RBP13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 TRAF1Q13077 416 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 PTK7Q13308 1070 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 ZNF618Q5T7W0 954 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 TRIM50Q86XT4 487 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 HERC6Q8IVU3 1022 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 RRP36Q96EU6 259 aaKnown RBP13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 TMEM87BQ96K49 555 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 MLXIPQ9HAP2 919 aa13.64□□□□□ -0.23
CLNS1A-202ENST00000525064 XIRP2A4UGR9 3374 aa13.63□□□□□ -0.23
CLNS1A-202ENST00000525064 NLRC5Q86WI3 1866 aa13.63□□□□□ -0.23
CLNS1A-202ENST00000525064 LCHNA4D1U4 455 aa13.63□□□□□ -0.23
CLNS1A-202ENST00000525064 CCDC69A6NI79 296 aa13.63□□□□□ -0.23
CLNS1A-202ENST00000525064 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms