RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ITGB3BPQ13352 177 aaPredicted RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 AP3B2Q13367 1082 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 MTMR1Q13613 665 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 PKP1Q13835 747 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 TTLL4Q14679 1199 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 ZNF174Q15697 407 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 KCNA10Q16322 511 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 HSDL1Q3SXM5 330 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 DUSP28Q4G0W2 176 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 GNASQ5JWF2 1037 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 UTP14CQ5TAP6 766 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 IFFO2Q5TF58 517 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 IQSEC1Q6DN90 963 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 CCDC62Q6P9F0 684 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 CXCL17Q6UXB2 119 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 KRT25Q7Z3Z0 450 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 PLA2G4DQ86XP0 818 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 TRIM50Q86XT4 487 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 MSL3Q8N5Y2 521 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 DAGLBQ8NCG7 672 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 FBXO18Q8NFZ0 1043 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 BICD2Q8TD16 824 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 SCFD2Q8WU76 684 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 CRYGNQ8WXF5 182 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 TNFRSF25Q93038 417 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 VTI1AQ96AJ9 217 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 SPATA33Q96N06 139 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 INPP4AQ96PE3 977 aaPredicted RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 MPHOSPH6Q99547 160 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 CRISPLD2Q9H0B8 497 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 AP5M1Q9H0R1 490 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 EHMT1Q9H9B1 1298 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 JADE2Q9NQC1 790 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 KCNH7Q9NS40 1196 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 MAP3K20Q9NYL2 800 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 DAXXQ9UER7 740 aaPredicted RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 DDX41Q9UJV9 622 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 GNEQ9Y223 722 aaKnown RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 LCTP09848 1927 aa5.24□□□□□ -1.57
CHMP4A-202ENST00000524955 A0A087WWV3 80 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 RBM47A0AV96 593 aaKnown RBP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 B4DLN1 442 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 KBTBD13C9JR72 458 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 MSH4O15457 936 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 FIBPO43427 364 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 DUSP11O75319 330 aaKnown RBP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 FARP2O94887 1054 aaPredicted RBP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 GH1P01241 217 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 ASGR1P07306 291 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 KCNA2P16389 499 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 SYT1P21579 422 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 MARK3P27448 753 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 ACLYP53396 1101 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 GJA9P57773 515 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 CEBPZQ03701 1054 aaKnown RBP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 SAFBQ15424 915 aaKnown RBP eCLIP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 FSCN1Q16658 493 aaKnown RBP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 LRRC26Q2I0M4 334 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 GNPTABQ3T906 1256 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 TPRNQ4KMQ1 711 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 CEP55Q53EZ4 464 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 CELF3Q5SZQ8 465 aaKnown RBP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 NEK8Q86SG6 692 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 NLRX1Q86UT6 975 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 POTEDQ86YR6 584 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 SAMD3Q8N6K7 520 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 ZBTB10Q96DT7 871 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 ZNF577Q9BSK1 485 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 FTOQ9C0B1 505 aaKnown RBP eCLIP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 MLXIPQ9HAP2 919 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 AGO4Q9HCK5 861 aaKnown RBP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 BRMS1Q9HCU9 246 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 TSHZ2Q9NRE2 1034 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 DDX25Q9UHL0 483 aaKnown RBP5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 OGDHLQ9ULD0 1010 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 ATP11BQ9Y2G3 1177 aa5.23□□□□□ -1.57
CHMP4A-202ENST00000524955 CENPFP49454 3210 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 A0A1W2PQ45 241 aaPredicted RBP5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 A0A1W2PQY0 241 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 IPO5O00410 1097 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 MEIS1O00470 390 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 DHX15O43143 795 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 MARCH6O60337 910 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 MSCO60682 206 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 CCNE2O96020 404 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 MMP3P08254 477 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 CYP3A4P08684 503 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 SYN1P17600 705 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 ICAM3P32942 547 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 TXKP42681 527 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 TOB1P50616 345 aaPredicted RBP5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 ZNF200P98182 395 aaPredicted RBP5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 TRIM60Q495X7 471 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 FAM47CQ5HY64 1035 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 MYSM1Q5VVJ2 828 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 CCSAPQ6IQ19 270 aaPredicted RBP5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 GALNT17Q6IS24 598 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 RNF180Q86T96 592 aa5.22□□□□□ -1.57
CHMP4A-202ENST00000524955 NOSTRINQ8IVI9 506 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms