RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 TTBK2Q6IQ55 1244 aa12.27□□□□□ -0.45
HDAC9-228ENST00000524023 MMGT1Q8N4V1 131 aa12.27□□□□□ -0.45
HDAC9-228ENST00000524023 CCDC155Q8N6L0 562 aa12.27□□□□□ -0.45
HDAC9-228ENST00000524023 GJA10Q969M2 543 aa12.27□□□□□ -0.45
HDAC9-228ENST00000524023 SERPINB13Q9UIV8 391 aa12.27□□□□□ -0.45
HDAC9-228ENST00000524023 COL4A3BPQ9Y5P4 624 aa12.27□□□□□ -0.45
HDAC9-228ENST00000524023 ZC3H4Q9UPT8 1303 aaKnown RBP12.27□□□□□ -0.45
HDAC9-228ENST00000524023 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.45
HDAC9-228ENST00000524023 TULP2O00295 520 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 CAPN2P17655 700 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 FKBP3Q00688 224 aaKnown RBP12.26□□□□□ -0.45
HDAC9-228ENST00000524023 ITIH3Q06033 890 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 MAPK8IP2Q13387 824 aaPredicted RBP12.26□□□□□ -0.45
HDAC9-228ENST00000524023 HYIQ5T013 277 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 CACNA2D4Q7Z3S7 1137 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 DRC1Q96MC2 740 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 ALS2CR12Q96Q35 445 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 TANGO6Q9C0B7 1094 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 PANK4Q9NVE7 773 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 SWAP70Q9UH65 585 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 PCDHA12Q9UN75 941 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 SSU72P8A0A1W2PR75 194 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 F8W031 263 aaPredicted RBP12.26□□□□□ -0.45
HDAC9-228ENST00000524023 TRAF5O00463 557 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 ZBTB5O15062 677 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 MARCH6O60337 910 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 RNF40O75150 1001 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 GCFC2P16383 781 aaKnown RBP12.26□□□□□ -0.45
HDAC9-228ENST00000524023 SHMT1P34896 483 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 SLC16A2P36021 539 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 GPATCH4Q5T3I0 446 aaKnown RBP12.26□□□□□ -0.45
HDAC9-228ENST00000524023 HGSNATQ68CP4 663 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 CCDC70Q6NSX1 233 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 ARHGAP27Q6ZUM4 889 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 GSPT2Q8IYD1 628 aaKnown RBP12.26□□□□□ -0.45
HDAC9-228ENST00000524023 MYO3BQ8WXR4 1341 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 MTMR8Q96EF0 704 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 CRAMP1Q96RY5 1269 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 OSBPL9Q96SU4 736 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 FAM204AQ9H8W3 233 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 SALL4Q9UJQ4 1053 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 USP21Q9UK80 565 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 SUGT1Q9Y2Z0 365 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 HYOU1Q9Y4L1 999 aa12.26□□□□□ -0.45
HDAC9-228ENST00000524023 GREB1LQ9C091 1923 aaPredicted RBP12.25□□□□□ -0.45
HDAC9-228ENST00000524023 KDM3AQ9Y4C1 1321 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 USP17L10C9JJH3 530 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 TOM1O60784 492 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 PRPF6O94906 941 aaKnown RBP12.25□□□□□ -0.45
HDAC9-228ENST00000524023 TCP1P17987 556 aaKnown RBP12.25□□□□□ -0.45
HDAC9-228ENST00000524023 GFPT1Q06210 699 aaPredicted RBP12.25□□□□□ -0.45
HDAC9-228ENST00000524023 RAD51AP2Q09MP3 1159 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 CCDC40Q4G0X9 1142 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 NFRKBQ6P4R8 1299 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 LEKR1Q6ZMV7 388 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 GDAP1L1Q96MZ0 367 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 SELENOOQ9BVL4 669 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 NT5C3AQ9H0P0 336 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 PSTPIP2Q9H939 334 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 BMP2KQ9NSY1 1161 aaPredicted RBP12.25□□□□□ -0.45
HDAC9-228ENST00000524023 CWC15Q9P013 229 aaKnown RBP12.25□□□□□ -0.45
HDAC9-228ENST00000524023 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
HDAC9-228ENST00000524023 QSER1Q2KHR3 1735 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 NOL4O94818 638 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 KCTD1Q719H9 257 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 CERS5Q8N5B7 392 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 SPATA4Q8NEY3 305 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 CEP63Q96MT8 703 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 FGFBP2Q9BYJ0 223 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 COA1Q9GZY4 146 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 CEP72Q9P209 647 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 FAM184BQ9ULE4 1060 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 PCDHA2Q9Y5H9 948 aa12.25□□□□□ -0.45
HDAC9-228ENST00000524023 ATAD5Q96QE3 1844 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 E9PMD0 336 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 RBAK-RBAKDNI3L0D1 243 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 RPS6KA5O75582 802 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 SSBP05455 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC9-228ENST00000524023 RASSF7Q02833 373 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 EZH2Q15910 746 aaKnown RBP12.24□□□□□ -0.45
HDAC9-228ENST00000524023 FAM83BQ5T0W9 1011 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 ANKRD13CQ8N6S4 541 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 AENQ8WTP8 325 aaKnown RBP12.24□□□□□ -0.45
HDAC9-228ENST00000524023 RUBCNQ92622 972 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 SYN2Q92777 582 aaPredicted RBP12.24□□□□□ -0.45
HDAC9-228ENST00000524023 NAP1L4Q99733 375 aaKnown RBP12.24□□□□□ -0.45
HDAC9-228ENST00000524023 CRACR2AQ9BSW2 395 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 LRRC1Q9BTT6 524 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 NUCKS1Q9H1E3 243 aaKnown RBP12.24□□□□□ -0.45
HDAC9-228ENST00000524023 NLRC4Q9NPP4 1024 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 TBC1D7Q9P0N9 293 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
HDAC9-228ENST00000524023 A0A0U1RQG5 324 aaPredicted RBP12.23□□□□□ -0.45
HDAC9-228ENST00000524023 KLRG2A4D1S0 409 aaPredicted RBP12.23□□□□□ -0.45
HDAC9-228ENST00000524023 TLR2O60603 784 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms