RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 UBA1P22314 1058 aaKnown RBP17.56■□□□□ 0.4
CSMD1-207ENST00000520451 KCNJ6P48051 423 aa17.56■□□□□ 0.4
CSMD1-207ENST00000520451 MYSM1Q5VVJ2 828 aa17.56■□□□□ 0.4
CSMD1-207ENST00000520451 HERC6Q8IVU3 1022 aa17.56■□□□□ 0.4
CSMD1-207ENST00000520451 MB21D2Q8IYB1 491 aaPredicted RBP17.56■□□□□ 0.4
CSMD1-207ENST00000520451 MAP4K1Q92918 833 aa17.56■□□□□ 0.4
CSMD1-207ENST00000520451 THEGQ9P2T0 379 aa17.56■□□□□ 0.4
CSMD1-207ENST00000520451 RBM8AQ9Y5S9 174 aaKnown RBP17.56■□□□□ 0.4
CSMD1-207ENST00000520451 BAZ2BQ9UIF8 2168 aaKnown RBP17.55■□□□□ 0.4
CSMD1-207ENST00000520451 KIF28PB7ZC32 967 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 PPFIA4O75335 1185 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 TGFB3P10600 412 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 CKBP12277 381 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 SP2Q02086 613 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 RBL2Q08999 1139 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 HSDL1Q3SXM5 330 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 MICALL1Q8N3F8 863 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 IGDCC4Q8TDY8 1250 aa17.55■□□□□ 0.4
CSMD1-207ENST00000520451 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.4
CSMD1-207ENST00000520451 TET1Q8NFU7 2136 aa17.54■□□□□ 0.4
CSMD1-207ENST00000520451 PARNO95453 639 aaKnown RBP17.54■□□□□ 0.4
CSMD1-207ENST00000520451 PTK7Q13308 1070 aa17.54■□□□□ 0.4
CSMD1-207ENST00000520451 GPNMBQ14956 572 aa17.54■□□□□ 0.4
CSMD1-207ENST00000520451 ZNF654Q8IZM8 581 aa17.54■□□□□ 0.4
CSMD1-207ENST00000520451 CTCFLQ8NI51 663 aaPredicted RBP17.54■□□□□ 0.4
CSMD1-207ENST00000520451 ATXN2LQ8WWM7 1075 aaKnown RBP17.54■□□□□ 0.4
CSMD1-207ENST00000520451 MYL10Q9BUA6 226 aa17.54■□□□□ 0.4
CSMD1-207ENST00000520451 CERS4Q9HA82 394 aa17.54■□□□□ 0.4
CSMD1-207ENST00000520451 MLXIPQ9HAP2 919 aa17.54■□□□□ 0.4
CSMD1-207ENST00000520451 LY9Q9HBG7 655 aa17.54■□□□□ 0.4
CSMD1-207ENST00000520451 TRIP12Q14669 1992 aaPredicted RBP17.53■□□□□ 0.4
CSMD1-207ENST00000520451 TRANK1O15050 2925 aa17.53■□□□□ 0.4
CSMD1-207ENST00000520451 RFXAPO00287 272 aa17.53■□□□□ 0.4
CSMD1-207ENST00000520451 NBNO60934 754 aa17.53■□□□□ 0.4
CSMD1-207ENST00000520451 DDAH1O94760 285 aa17.53■□□□□ 0.4
CSMD1-207ENST00000520451 WDR5P61964 334 aaKnown RBP17.53■□□□□ 0.4
CSMD1-207ENST00000520451 ZNF200P98182 395 aaPredicted RBP17.53■□□□□ 0.4
CSMD1-207ENST00000520451 GNPTABQ3T906 1256 aa17.53■□□□□ 0.4
CSMD1-207ENST00000520451 CNKSR3Q6P9H4 555 aa17.53■□□□□ 0.4
CSMD1-207ENST00000520451 CASC1Q6TDU7 716 aa17.53■□□□□ 0.4
CSMD1-207ENST00000520451 WNT8BQ93098 351 aa17.53■□□□□ 0.4
CSMD1-207ENST00000520451 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 MUC3AQ02505 3323 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 PRC1O43663 620 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 TLL1O43897 1013 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 ARHGEF15O94989 841 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 CXCL10P02778 98 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 KIF5BP33176 963 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 MRPS9P82933 396 aaKnown RBP17.52■□□□□ 0.4
CSMD1-207ENST00000520451 TAP1Q03518 808 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 TRIM71Q2Q1W2 868 aaKnown RBP17.52■□□□□ 0.4
CSMD1-207ENST00000520451 ZNF618Q5T7W0 954 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 NFXL1Q6ZNB6 911 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 ARNTL2Q8WYA1 636 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 RRP36Q96EU6 259 aaKnown RBP17.52■□□□□ 0.4
CSMD1-207ENST00000520451 ASB2Q96Q27 587 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 MAP3K14Q99558 947 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 C16orf70Q9BSU1 422 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 SPZ1Q9BXG8 430 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 MYH7BA7E2Y1 1941 aa17.52■□□□□ 0.4
CSMD1-207ENST00000520451 REV3LO60673 3130 aa17.52■□□□□ 0.39
CSMD1-207ENST00000520451 EPOPA6NHQ4 379 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 NOP56O00567 594 aaKnown RBP17.51■□□□□ 0.39
CSMD1-207ENST00000520451 GTPBP6O43824 516 aaPredicted RBP17.51■□□□□ 0.39
CSMD1-207ENST00000520451 STAM2O75886 525 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 DEFB103AP81534 67 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 MRPS5P82675 430 aaKnown RBP17.51■□□□□ 0.39
CSMD1-207ENST00000520451 HIC1Q14526 733 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 TRAF7Q6Q0C0 670 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 TMCO2Q7Z6W1 182 aaPredicted RBP17.51■□□□□ 0.39
CSMD1-207ENST00000520451 SMARCC2Q8TAQ2 1214 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 CUL5Q93034 780 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 INPP4AQ96PE3 977 aaPredicted RBP17.51■□□□□ 0.39
CSMD1-207ENST00000520451 ZBED2Q9BTP6 218 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 TSPYL2Q9H2G4 693 aaPredicted RBP17.51■□□□□ 0.39
CSMD1-207ENST00000520451 BCAS3Q9H6U6 928 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 RTEL1Q9NZ71 1219 aa17.51■□□□□ 0.39
CSMD1-207ENST00000520451 SEC63Q9UGP8 760 aaKnown RBP17.51■□□□□ 0.39
CSMD1-207ENST00000520451 C17orf102A2RUQ5 167 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 CCDC69A6NI79 296 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 H3BRB1 525 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 SH2B2O14492 632 aaPredicted RBP17.5■□□□□ 0.39
CSMD1-207ENST00000520451 LGALS2P05162 132 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 ICAM3P32942 547 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 MCM5P33992 734 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 TCTN1Q2MV58 587 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 USP17L6PQ6QN14 398 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 CYFIP1Q7L576 1253 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 SERINC5Q86VE9 423 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 LZTS2Q9BRK4 669 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 MTA3Q9BTC8 594 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 LSG1Q9H089 658 aaKnown RBP17.5■□□□□ 0.39
CSMD1-207ENST00000520451 TUT1Q9H6E5 874 aaKnown RBP17.5■□□□□ 0.39
CSMD1-207ENST00000520451 MTCH2Q9Y6C9 303 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 XIRP2A4UGR9 3374 aa17.5■□□□□ 0.39
CSMD1-207ENST00000520451 ABHD14A-ACY1A0A1B0GW23 586 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 LCHNA4D1U4 455 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 SPATA31C2B4DYI2 1134 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 RBAK-RBAKDNI3L0D1 243 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 SLC27A2O14975 620 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms