RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SORBS3O60504 671 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 GGPS1O95749 300 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 UBA1P22314 1058 aaKnown RBP14.39□□□□□ -0.11
CSMD1-205ENST00000519623 MRPS9P82933 396 aaKnown RBP14.39□□□□□ -0.11
CSMD1-205ENST00000519623 HIC1Q14526 733 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 MFSD10Q14728 455 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 NECTIN1Q15223 517 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 KIAA0753Q2KHM9 967 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 PHOSPHO2Q8TCD6 241 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 AFAP1L1Q8TED9 768 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 PIBF1Q8WXW3 757 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 SPATA33Q96N06 139 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 ESYT1Q9BSJ8 1104 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 C16orf70Q9BSU1 422 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 KATNAL1Q9BW62 490 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 SPZ1Q9BXG8 430 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 FTOQ9C0B1 505 aaKnown RBP eCLIP14.39□□□□□ -0.11
CSMD1-205ENST00000519623 PRDM6Q9NQX0 595 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 TANC1Q9C0D5 1861 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 FRMPD4Q14CM0 1322 aa14.39□□□□□ -0.11
CSMD1-205ENST00000519623 SLC27A2O14975 620 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 DDAH1O94760 285 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 CKBP12277 381 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 SELPP16109 830 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 MCM5P33992 734 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 ZNF200P98182 395 aaPredicted RBP14.38□□□□□ -0.11
CSMD1-205ENST00000519623 TRIM71Q2Q1W2 868 aaKnown RBP14.38□□□□□ -0.11
CSMD1-205ENST00000519623 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 CASC1Q6TDU7 716 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 TMTC2Q8N394 836 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 SRBD1Q8N5C6 995 aaKnown RBP14.38□□□□□ -0.11
CSMD1-205ENST00000519623 CCDC155Q8N6L0 562 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 WNT8BQ93098 351 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 INPP4AQ96PE3 977 aaPredicted RBP14.38□□□□□ -0.11
CSMD1-205ENST00000519623 SLC9A7Q96T83 725 aa14.38□□□□□ -0.11
CSMD1-205ENST00000519623 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 SH2B2O14492 632 aaPredicted RBP14.37□□□□□ -0.11
CSMD1-205ENST00000519623 MEIS2O14770 477 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 NBNO60934 754 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 CXCL10P02778 98 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 IGFBP4P22692 258 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 ICAM3P32942 547 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 KIF5BP33176 963 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 LIFRP42702 1097 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 SEMA3FQ13275 785 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 PTK7Q13308 1070 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 PPP2R2DQ66LE6 453 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 CREB3L3Q68CJ9 461 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 USP17L6PQ6QN14 398 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 CTCFLQ8NI51 663 aaPredicted RBP14.37□□□□□ -0.11
CSMD1-205ENST00000519623 PPM1EQ8WY54 764 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 RRP36Q96EU6 259 aaKnown RBP14.37□□□□□ -0.11
CSMD1-205ENST00000519623 TMEM87BQ96K49 555 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 LZTS2Q9BRK4 669 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 MLXIPQ9HAP2 919 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 RTEL1Q9NZ71 1219 aa14.37□□□□□ -0.11
CSMD1-205ENST00000519623 RBAK-RBAKDNI3L0D1 243 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 STAM2O75886 525 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 BAIAP3O94812 1187 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 PLEKHA8P1O95397 391 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 PARNO95453 639 aaKnown RBP14.36□□□□□ -0.11
CSMD1-205ENST00000519623 CA3P07451 260 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 GNAQP50148 359 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 CCDC85BQ15834 202 aaPredicted RBP14.36□□□□□ -0.11
CSMD1-205ENST00000519623 TCTN1Q2MV58 587 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 SKAP1Q86WV1 359 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
CSMD1-205ENST00000519623 CMTR1Q8N1G2 835 aaKnown RBP14.36□□□□□ -0.11
CSMD1-205ENST00000519623 SPTBN5Q9NRC6 3674 aaKnown RBP14.36□□□□□ -0.11
CSMD1-205ENST00000519623 PTPRSQ13332 1948 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 CCDC69A6NI79 296 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 H3BRB1 525 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 ARHGEF15O94989 841 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 RXRAP19793 462 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 HOXC8P31273 242 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 MBTPS1Q14703 1052 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 GNPTABQ3T906 1256 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 PCNX4Q63HM2 1172 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 NFXL1Q6ZNB6 911 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 TUT1Q9H6E5 874 aaKnown RBP14.35□□□□□ -0.11
CSMD1-205ENST00000519623 TELO2Q9Y4R8 837 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 TRANK1O15050 2925 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 PRRC2BQ5JSZ5 2229 aaKnown RBP14.35□□□□□ -0.11
CSMD1-205ENST00000519623 DOCK5Q9H7D0 1870 aa14.35□□□□□ -0.11
CSMD1-205ENST00000519623 RFXAPO00287 272 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 LGALS2P05162 132 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 POU3F3P20264 500 aaPredicted RBP14.34□□□□□ -0.11
CSMD1-205ENST00000519623 WDR5P61964 334 aaKnown RBP14.34□□□□□ -0.11
CSMD1-205ENST00000519623 TAP1Q03518 808 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 NEDD9Q14511 834 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 XRRA1Q6P2D8 792 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 CNKSR3Q6P9H4 555 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 METTL7BQ6UX53 244 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 CYFIP1Q7L576 1253 aa14.34□□□□□ -0.11
CSMD1-205ENST00000519623 SERINC5Q86VE9 423 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms