RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 SUGCTQ9HAC7 445 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 SENP2Q9HC62 589 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 C11orf16Q9NQ32 467 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 TELO2Q9Y4R8 837 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 MRVI1Q9Y6F6 885 aa10.2□□□□□ -0.78
TRIM35-202ENST00000519219 B4DLN1 442 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 KIF28PB7ZC32 967 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 GJB5O95377 273 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 PARP1P09874 1014 aaKnown RBP10.19□□□□□ -0.78
TRIM35-202ENST00000519219 MYCLP12524 364 aaPredicted RBP10.19□□□□□ -0.78
TRIM35-202ENST00000519219 HOXD8P13378 290 aaPredicted RBP10.19□□□□□ -0.78
TRIM35-202ENST00000519219 MRPL12P52815 198 aaKnown RBP10.19□□□□□ -0.78
TRIM35-202ENST00000519219 ERVK-21P61565 698 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 PTK7Q13308 1070 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 SEC23AQ15436 765 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 SMC5Q8IY18 1101 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 DHX37Q8IY37 1157 aaKnown RBP10.19□□□□□ -0.78
TRIM35-202ENST00000519219 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 PPTC7Q8NI37 304 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
TRIM35-202ENST00000519219 IWS1Q96ST2 819 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 PDCD2LQ9BRP1 358 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 C17orf80Q9BSJ5 609 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 LRFN3Q9BTN0 628 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 ZBED2Q9BTP6 218 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 COG5Q9UP83 839 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 MRPL11Q9Y3B7 192 aaKnown RBP10.19□□□□□ -0.78
TRIM35-202ENST00000519219 TAF6LQ9Y6J9 622 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 LOXHD1Q8IVV2 1947 aa10.19□□□□□ -0.78
TRIM35-202ENST00000519219 EIF3JO75822 258 aaKnown RBP10.18□□□□□ -0.78
TRIM35-202ENST00000519219 GGPS1O95749 300 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 UBA1P22314 1058 aaKnown RBP10.18□□□□□ -0.78
TRIM35-202ENST00000519219 GHRHRQ02643 423 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 PGM5Q15124 567 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 CELF3Q5SZQ8 465 aaKnown RBP10.18□□□□□ -0.78
TRIM35-202ENST00000519219 MYSM1Q5VVJ2 828 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 IQCA1Q86XH1 822 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 MCF2L2Q86YR7 1114 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 MTMR8Q96EF0 704 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 SPATA33Q96N06 139 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 TGS1Q96RS0 853 aaKnown RBP10.18□□□□□ -0.78
TRIM35-202ENST00000519219 C16orf70Q9BSU1 422 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 DIAPH3Q9NSV4 1193 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 MAD2L2Q9UI95 211 aa10.18□□□□□ -0.78
TRIM35-202ENST00000519219 MUC6Q6W4X9 2439 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 RALGAPA2Q2PPJ7 1873 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 ABHD14A-ACY1A0A1B0GW23 586 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 KLRF2D3W0D1 207 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 LGR5O75473 907 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 MFAP1P55081 439 aaKnown RBP10.17□□□□□ -0.78
TRIM35-202ENST00000519219 NUCB1Q02818 461 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 SEMA3FQ13275 785 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 LAMC2Q13753 1193 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 SERINC5Q86VE9 423 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 CHD1LQ86WJ1 897 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 TICAM2Q86XR7 235 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 HOMER1Q86YM7 354 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 DBF4BQ8NFT6 615 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 FAM122AQ96E09 287 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 PIGSQ96S52 555 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 RAD9AQ99638 391 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 DSCC1Q9BVC3 393 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 C1QTNF1Q9BXJ1 281 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 AMNQ9BXJ7 453 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 OSBPL3Q9H4L5 887 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 UBE2ZQ9H832 354 aaPredicted RBP10.17□□□□□ -0.78
TRIM35-202ENST00000519219 SUPT16HQ9Y5B9 1047 aaKnown RBP10.17□□□□□ -0.78
TRIM35-202ENST00000519219 PCDHA1Q9Y5I3 950 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 KIAA1671Q9BY89 1806 aa10.17□□□□□ -0.78
TRIM35-202ENST00000519219 PALM3A6NDB9 673 aaPredicted RBP10.16□□□□□ -0.78
TRIM35-202ENST00000519219 ZBTB5O15062 677 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 TREHO43280 583 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 CYTH3O43739 400 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 CTSHP09668 335 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 SMIM10L2AP0DMW4 78 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 SMIM10L2BP0DMW5 78 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 IL9P15248 144 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 HOXC8P31273 242 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 THPOP40225 353 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 IKBKEQ14164 716 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 CCDC178Q5BJE1 867 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 IFIT1BQ5T764 474 aaKnown RBP10.16□□□□□ -0.78
TRIM35-202ENST00000519219 STOX1Q6ZVD7 989 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 VSIG10LQ86VR7 867 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 FCHSD1Q86WN1 690 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 TRIM50Q86XT4 487 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 MYOCDQ8IZQ8 938 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.16□□□□□ -0.78
TRIM35-202ENST00000519219 PIBF1Q8WXW3 757 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 UBAC1Q9BSL1 405 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 KATNAL1Q9BW62 490 aa10.16□□□□□ -0.78
TRIM35-202ENST00000519219 COL4A6Q14031 1691 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.15□□□□□ -0.78
TRIM35-202ENST00000519219 RSPH10B2B2RC85 870 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 LGALS2P05162 132 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 RSPH10BP0C881 870 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 KCNA5P22460 613 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 PDE4AP27815 886 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 MRPS9P82933 396 aaKnown RBP10.15□□□□□ -0.78
TRIM35-202ENST00000519219 HTRA4P83105 476 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms