RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 IKBKBO14920 756 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 STAM2O75886 525 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 CELF2O95319 508 aaKnown RBP16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 CCND2P30279 289 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 SPIRE1Q08AE8 756 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 MOGSQ13724 837 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 KCNB1Q14721 858 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 PGM5Q15124 567 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 LRCH2Q5VUJ6 765 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 CHADLQ6NUI6 762 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 LUZP1Q86V48 1076 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 NSUN6Q8TEA1 469 aaKnown RBP16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 LARP4BQ92615 738 aaKnown RBP16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 PNMA5Q96PV4 448 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 TAAR1Q96RJ0 339 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 PPP1R9BQ96SB3 815 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 RIT2Q99578 217 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 PDCD2LQ9BRP1 358 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 ZNF577Q9BSK1 485 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 SPATC1LQ9H0A9 340 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 JADE2Q9NQC1 790 aa16.9■□□□□ 0.3
TRAPPC9-205ENST00000518839 GAS7O60861 476 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 PSMD10O75832 226 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 RPN1P04843 607 aaKnown RBP16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 ZBTB48P10074 688 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 MUTP22033 750 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 GJA5P36382 358 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 UBXN2AP68543 259 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 PPP2R5CQ13362 524 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 NCAPH2Q6IBW4 605 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 GPAT2Q6NUI2 795 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 CYP2W1Q8TAV3 490 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 RAD54LQ92698 747 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 PLIN2Q99541 437 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 C7orf25Q9BPX7 421 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 TEKT3Q9BXF9 490 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 CYP39A1Q9NYL5 469 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 VAV3Q9UKW4 847 aa16.89■□□□□ 0.29
TRAPPC9-205ENST00000518839 MAFGO15525 162 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 EIF2AK2P19525 551 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 RPA1P27694 616 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 CUL4BQ13620 913 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 CNNM4Q6P4Q7 775 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 NLRX1Q86UT6 975 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 DHX40Q8IX18 779 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 AOPEPQ8N6M6 819 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 MTRQ99707 1265 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 POLR3CQ9BUI4 534 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 A1CFQ9NQ94 594 aaKnown RBP16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 BTBD7Q9P203 1132 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 LCTP09848 1927 aa16.88■□□□□ 0.29
TRAPPC9-205ENST00000518839 B4DLN1 442 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 IPO5O00410 1097 aaKnown RBP16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 PPP1R2P41236 205 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 MYL5Q02045 173 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 ISM2Q6H9L7 571 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 OTOP1Q7RTM1 612 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 VSIG10LQ86VR7 867 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 ANKRD35Q8N283 1001 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 NEK9Q8TD19 979 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 STAMQ92783 540 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 GJA10Q969M2 543 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 GPRASP2Q96D09 838 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 CDHR1Q96JP9 859 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 PDLIM2Q96JY6 352 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 IWS1Q96ST2 819 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 TRIM9Q9C026 710 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 BLZF1Q9H2G9 400 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 TUFT1Q9NNX1 390 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 TBC1D22BQ9NU19 505 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 BLOC1S4Q9NUP1 217 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 TCEAL9Q9UHQ7 104 aa16.87■□□□□ 0.29
TRAPPC9-205ENST00000518839 KIAA1217Q5T5P2 1943 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 A0A087WWV3 80 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 NR3C2P08235 984 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 ARP10275 920 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 MYCLP12524 364 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 ITGB5P18084 799 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 MRPS9P82933 396 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 MTMR1Q13613 665 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 ZNF658Q5TYW1 1059 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 SARM1Q6SZW1 724 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 ANKRD23Q86SG2 305 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 SHCBP1Q8NEM2 672 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 IL31RAQ8NI17 732 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 MPHOSPH6Q99547 160 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 NUDT12Q9BQG2 462 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 PAGR1Q9BTK6 254 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 KCNH7Q9NS40 1196 aa16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 BMP2KQ9NSY1 1161 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-205ENST00000518839 CCL15-CCL14A0A0B4J2E2 113 aa16.85■□□□□ 0.29
TRAPPC9-205ENST00000518839 PVALEFA0A1B0GWK0 134 aa16.85■□□□□ 0.29
TRAPPC9-205ENST00000518839 CNMDO75829 334 aa16.85■□□□□ 0.29
TRAPPC9-205ENST00000518839 RHOBTB3O94955 611 aa16.85■□□□□ 0.29
TRAPPC9-205ENST00000518839 ITGBL1O95965 494 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms