RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 FAM86C2PA6NEL3 165 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 LGR5O75473 907 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 GGPS1O95749 300 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 NT5C2P49902 561 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 ERVK-21P61565 698 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 MBTPS1Q14703 1052 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 TMEM31Q5JXX7 168 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 HOMER1Q86YM7 354 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 MYOCDQ8IZQ8 938 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 KRT23Q9C075 422 aa17.71■□□□□ 0.43
CSGALNACT1-204ENST00000517494 KLRF2D3W0D1 207 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 HAS3O00219 553 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 AMHP03971 560 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 HSD17B4P51659 736 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 TRIM71Q2Q1W2 868 aaKnown RBP17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 HSDL1Q3SXM5 330 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 TRAF7Q6Q0C0 670 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 FBXO22Q8NEZ5 403 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 MLXIPQ9HAP2 919 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 LMCD1Q9NZU5 365 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 CTNNA3Q9UI47 895 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PCDHA1Q9Y5I3 950 aa17.7■□□□□ 0.42
CSGALNACT1-204ENST00000517494 RSPH10B2B2RC85 870 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 OPLAHO14841 1288 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 RSPH10BP0C881 870 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 UBA1P22314 1058 aaKnown RBP17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 KCNA5P22460 613 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 HIC1Q14526 733 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PGM5Q15124 567 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 CELF3Q5SZQ8 465 aaKnown RBP17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 MYSM1Q5VVJ2 828 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 FCHSD1Q86WN1 690 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PLEKHM2Q8IWE5 1019 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 DBF4BQ8NFT6 615 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 IL31RAQ8NI17 732 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 KHSRPQ92945 711 aaKnown RBP eCLIP17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 DSCC1Q9BVC3 393 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 RWDD1Q9H446 243 aaPredicted RBP17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 UBE2ZQ9H832 354 aaPredicted RBP17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 CNNM2Q9H8M5 875 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 INSL6Q9Y581 213 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 TRIP12Q14669 1992 aaPredicted RBP17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 EMSYQ7Z589 1322 aa17.69■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PTPRSQ13332 1948 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 C17orf102A2RUQ5 167 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 HIP1O00291 1037 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 ZBTB5O15062 677 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PPP1R11O60927 126 aaPredicted RBP17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PPFIA4O75335 1185 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 RGS20O76081 388 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 CTSHP09668 335 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 KCNV1Q6PIU1 500 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 GPKOWQ92917 476 aaPredicted RBP eCLIP17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 ATP6V0A1Q93050 837 aa17.68■□□□□ 0.42
CSGALNACT1-204ENST00000517494 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
CSGALNACT1-204ENST00000517494 NOP56O00567 594 aaKnown RBP17.67■□□□□ 0.42
CSGALNACT1-204ENST00000517494 POLR2MP0CAP2 368 aa17.67■□□□□ 0.42
CSGALNACT1-204ENST00000517494 CCND2P30279 289 aa17.67■□□□□ 0.42
CSGALNACT1-204ENST00000517494 SSTR3P32745 418 aaPredicted RBP17.67■□□□□ 0.42
CSGALNACT1-204ENST00000517494 SP2Q02086 613 aa17.67■□□□□ 0.42
CSGALNACT1-204ENST00000517494 EP400NLQ6ZTU2 488 aa17.67■□□□□ 0.42
CSGALNACT1-204ENST00000517494 SERINC5Q86VE9 423 aa17.67■□□□□ 0.42
CSGALNACT1-204ENST00000517494 LAMA4Q16363 1823 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 UPP2O95045 317 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 SMIM10L2AP0DMW4 78 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 SMIM10L2BP0DMW5 78 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 HOXD8P13378 290 aaPredicted RBP17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 STOX1Q6ZVD7 989 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 VSIG10LQ86VR7 867 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 SMC5Q8IY18 1101 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PIBF1Q8WXW3 757 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PIGSQ96S52 555 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 YME1L1Q96TA2 773 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 C16orf70Q9BSU1 422 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 CD320Q9NPF0 282 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 MAD2L2Q9UI95 211 aa17.66■□□□□ 0.42
CSGALNACT1-204ENST00000517494 H3BRB1 525 aa17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 LGALS2P05162 132 aa17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 NUCB1Q02818 461 aa17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 PTPROQ16827 1216 aa17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 CYB5R4Q7L1T6 521 aa17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 SEPT8Q92599 483 aa17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 OSBPL3Q9H4L5 887 aa17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 TUT1Q9H6E5 874 aaKnown RBP17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 MAP3K20Q9NYL2 800 aaKnown RBP17.65■□□□□ 0.42
CSGALNACT1-204ENST00000517494 KIAA1217Q5T5P2 1943 aa17.64■□□□□ 0.42
CSGALNACT1-204ENST00000517494 TREHO43280 583 aa17.64■□□□□ 0.41
CSGALNACT1-204ENST00000517494 TGFB3P10600 412 aa17.64■□□□□ 0.41
CSGALNACT1-204ENST00000517494 IL9P15248 144 aa17.64■□□□□ 0.41
CSGALNACT1-204ENST00000517494 SP4Q02446 784 aa17.64■□□□□ 0.41
CSGALNACT1-204ENST00000517494 GHRHRQ02643 423 aa17.64■□□□□ 0.41
CSGALNACT1-204ENST00000517494 TRDNQ13061 729 aa17.64■□□□□ 0.41
CSGALNACT1-204ENST00000517494 SEC23AQ15436 765 aa17.64■□□□□ 0.41
CSGALNACT1-204ENST00000517494 GNPTABQ3T906 1256 aa17.64■□□□□ 0.41
CSGALNACT1-204ENST00000517494 LEXMQ3ZCV2 418 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms