RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 ATG4CQ96DT6 458 aa3.7□□□□□ -1.82
RN7SKP40-201ENST00000517211 BBC3Q96PG8 261 aaPredicted RBP3.7□□□□□ -1.82
RN7SKP40-201ENST00000517211 RBPJLQ9UBG7 517 aa3.7□□□□□ -1.82
RN7SKP40-201ENST00000517211 DCTN4Q9UJW0 460 aa3.7□□□□□ -1.82
RN7SKP40-201ENST00000517211 TPD52L2O43399 206 aaKnown RBP3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 COL6A1P12109 1028 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 ZNF445P59923 1031 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 FAM160A1Q05DH4 1040 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 FMR1Q06787 632 aaKnown RBP eCLIP3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 TRMT10BQ6PF06 316 aaKnown RBP3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 CCDC84Q86UT8 332 aaPredicted RBP3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 UBXN4Q92575 508 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 MRRFQ96E11 262 aaKnown RBP3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 C8orf37Q96NL8 207 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 DNAJC2Q99543 621 aaKnown RBP3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 KRTAP1-5Q9BYS1 174 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 CNNM2Q9H8M5 875 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 SEC61A2Q9H9S3 476 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 PCDH18Q9HCL0 1135 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 CEP72Q9P209 647 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 ADAM29Q9UKF5 820 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 PCDHB14Q9Y5E9 798 aa3.69□□□□□ -1.82
RN7SKP40-201ENST00000517211 CENPBP07199 599 aaPredicted RBP3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 TCF3P15923 654 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 MAPK1P28482 360 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 GPR162Q16538 588 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 TDRD10Q5VZ19 366 aaKnown RBP3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 DCAF15Q66K64 600 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 MAMDC4Q6UXC1 1216 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 REC114Q7Z4M0 266 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 C7orf61Q8IZ16 206 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 GPATCH11Q8N954 259 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 MICAL1Q8TDZ2 1067 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 BRIP1Q9BX63 1249 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 GMIPQ9P107 970 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 KIAA1522Q9P206 1035 aaPredicted RBP3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 FTSJ1Q9UET6 329 aa3.68□□□□□ -1.82
RN7SKP40-201ENST00000517211 HMGB1P1B2RPK0 211 aaPredicted RBP3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 POU3F3P20264 500 aaPredicted RBP3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 MCCP23508 829 aa3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 EIF4BP23588 611 aaKnown RBP3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 ACRV1P26436 265 aa3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 LMNB2Q03252 620 aa3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 RAD51AP2Q09MP3 1159 aa3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 GRM7Q14831 915 aa3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 NOLC1Q14978 699 aaKnown RBP eCLIP3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 SPTY2D1Q68D10 685 aaPredicted RBP3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 ZC3H18Q86VM9 953 aaKnown RBP3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 PLEKHO2Q8TD55 490 aa3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 NEIL1Q96FI4 390 aaPredicted RBP3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 PRRX2Q99811 253 aa3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 BARX1Q9HBU1 254 aaPredicted RBP3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 BRMS1Q9HCU9 246 aa3.67□□□□□ -1.82
RN7SKP40-201ENST00000517211 CC2D2AQ9P2K1 1620 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 DISP3Q9P2K9 1392 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 ERCC3P19447 782 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 SF3A1Q15459 793 aaKnown RBP3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 FAM126BQ8IXS8 530 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 FIBCD1Q8N539 461 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 WASF1Q92558 559 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 ZDHHC15Q96MV8 337 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 RIOX1Q9H6W3 641 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 FAM86C1Q9NVL1 165 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 SLC4A7Q9Y6M7 1214 aa3.66□□□□□ -1.82
RN7SKP40-201ENST00000517211 RB1CC1Q8TDY2 1594 aa3.65□□□□□ -1.82
RN7SKP40-201ENST00000517211 KLHL18O94889 574 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 NOP2P46087 812 aaKnown RBP3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 FAM50AQ14320 339 aaKnown RBP3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 NLRC3Q7RTR2 1065 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 MILR1Q7Z6M3 343 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 RALYLQ86SE5 291 aaKnown RBP3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 PRIMA1Q86XR5 153 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 TMTC2Q8N394 836 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 DPF3Q92784 378 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 SMARCC1Q92922 1105 aaPredicted RBP3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 RHOVQ96L33 236 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 SLC9A7Q96T83 725 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 BIN2Q9UBW5 565 aaPredicted RBP3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 PPP1R1BQ9UD71 204 aaPredicted RBP3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 SUGT1Q9Y2Z0 365 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 LAS1LQ9Y4W2 734 aaKnown RBP3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 ERCC6Q03468 1493 aa3.65□□□□□ -1.83
RN7SKP40-201ENST00000517211 C7orf72A4D263 438 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 RAB11FIP3O75154 756 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 RPS6KA4O75676 772 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 RAD17O75943 681 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 LMNAP02545 664 aaKnown RBP3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 RALBP1Q15311 655 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 MBNL2Q5VZF2 373 aaKnown RBP3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 MBLAC2Q68D91 279 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 TMC5Q6UXY8 1006 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 DNAJC14Q6Y2X3 702 aaPredicted RBP3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 VRK3Q8IV63 474 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 CCDC144CPQ8IYA2 1237 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 GOLM1Q8NBJ4 401 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 MORC4Q8TE76 937 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 OR14A2Q96R54 314 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 NOL6Q9H6R4 1146 aaKnown RBP3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 PRR13Q9NZ81 148 aa3.64□□□□□ -1.83
RN7SKP40-201ENST00000517211 ZNHIT2Q9UHR6 403 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms