RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 HOMER1Q86YM7 354 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 ADAMTS19Q8TE59 1207 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 ALG1Q9BT22 464 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 RIOX1Q9H6W3 641 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PTPRSQ13332 1948 aa16.93■□□□□ 0.3
SCARNA20.5-201ENST00000516991 BAZ2BQ9UIF8 2168 aaKnown RBP16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 ABHD14A-ACY1A0A1B0GW23 586 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PPFIA4O75335 1185 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 RGS20O76081 388 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 GGPS1O95749 300 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CYP21A2P08686 494 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PDE4AP27815 886 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 HOXA13P31271 388 aaPredicted RBP16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 WTAPQ15007 396 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 MYSM1Q5VVJ2 828 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 NCOA7Q8NI08 942 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 SPATA33Q96N06 139 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 UHRF1Q96T88 793 aaPredicted RBP16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 MTCH2Q9Y6C9 303 aa16.92■□□□□ 0.3
SCARNA20.5-201ENST00000516991 COL4A4P53420 1690 aaPredicted RBP16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PNMA6FA0A0J9YX94 578 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 STAM2O75886 525 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 UBA1P22314 1058 aaKnown RBP16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CHMLP26374 656 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 SKIV2LQ15477 1246 aaKnown RBP16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 GNPTABQ3T906 1256 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CATIPQ7Z7H3 387 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 IL31RAQ8NI17 732 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 ARNTL2Q8WYA1 636 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 PIGSQ96S52 555 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 ZBED2Q9BTP6 218 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 EMSYQ7Z589 1322 aa16.91■□□□□ 0.3
SCARNA20.5-201ENST00000516991 NBNO60934 754 aa16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 TROAPQ12815 778 aa16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 GPNMBQ14956 572 aa16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 TRIM71Q2Q1W2 868 aaKnown RBP16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 HSDL1Q3SXM5 330 aa16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 CERS4Q9HA82 394 aa16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 MLXIPQ9HAP2 919 aa16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 FRMPD4Q14CM0 1322 aa16.9■□□□□ 0.3
SCARNA20.5-201ENST00000516991 EPOPA6NHQ4 379 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 E7EWF7 191 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 RFXAPO00287 272 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ARHGEF15O94989 841 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 PTH1RQ03431 593 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 IKBKEQ14164 716 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SLC35G1Q2M3R5 365 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 MAP3K14Q99558 947 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 COG5Q9UP83 839 aa16.89■□□□□ 0.29
SCARNA20.5-201ENST00000516991 NOP56O00567 594 aaKnown RBP16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SGSM2O43147 1006 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 CYTH3O43739 400 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 GJB5O95377 273 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 DEFB103AP81534 67 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ZNF618Q5T7W0 954 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SERINC5Q86VE9 423 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 INPP4AQ96PE3 977 aaPredicted RBP16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 RAD9AQ99638 391 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 C16orf70Q9BSU1 422 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SPZ1Q9BXG8 430 aa16.88■□□□□ 0.29
SCARNA20.5-201ENST00000516991 MICAL3Q7RTP6 2002 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 C17orf102A2RUQ5 167 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 H3BRB1 525 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 CAND2O75155 1236 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 LGR5O75473 907 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 DDAH1O94760 285 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 HOXC8P31273 242 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ICAM3P32942 547 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 KIF5BP33176 963 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 GRB10Q13322 594 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 NEDD9Q14511 834 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 TRAF7Q6Q0C0 670 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 METTL7BQ6UX53 244 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 CTCFLQ8NI51 663 aaPredicted RBP16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 MTA3Q9BTC8 594 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SENP2Q9HC62 589 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 LMCD1Q9NZU5 365 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 BDP1A6H8Y1 2624 aa16.87■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SIP14410 1827 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 MUC3AQ02505 3323 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 FIBPO43427 364 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SORBS3O60504 671 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 LGALS2P05162 132 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SP2Q02086 613 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 XRRA1Q6P2D8 792 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 MB21D2Q8IYB1 491 aaPredicted RBP16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 CUL5Q93034 780 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ATP6V0A1Q93050 837 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 WNT8BQ93098 351 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 RRP36Q96EU6 259 aaKnown RBP16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 TGS1Q96RS0 853 aaKnown RBP16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SEC63Q9UGP8 760 aaKnown RBP16.86■□□□□ 0.29
SCARNA20.5-201ENST00000516991 LCHNA4D1U4 455 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 RSPH10B2B2RC85 870 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 RSPH10BP0C881 870 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SMIM10L2AP0DMW4 78 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SMIM10L2BP0DMW5 78 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms