RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 ZYXQ15942 572 aaKnown RBP11.21□□□□□ -0.62
SMG7-215ENST00000515829 KSR1Q8IVT5 923 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 CCDC105Q8IYK2 499 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 ZNF34Q8IZ26 560 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 NSUN4Q96CB9 384 aaKnown RBP11.21□□□□□ -0.62
SMG7-215ENST00000515829 BICD1Q96G01 975 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 RIC8AQ9NPQ8 531 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 SH3GLB2Q9NR46 395 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 STK17AQ9UEE5 414 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 ATP8A1Q9Y2Q0 1164 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 ALS2CLQ60I27 953 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 GSTA5Q7RTV2 222 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 SYCE1Q8N0S2 351 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 BARHL2Q9NY43 387 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 PCDHA1Q9Y5I3 950 aa11.21□□□□□ -0.62
SMG7-215ENST00000515829 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 PSMD14O00487 310 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 TDP2O95551 362 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 SERPING1P05155 500 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 MAP2K2P36507 400 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 MTMR3Q13615 1198 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 WDR78Q5VTH9 848 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 UNC13DQ70J99 1090 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 CACNA2D3Q8IZS8 1091 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 NAP1L3Q99457 506 aaPredicted RBP11.2□□□□□ -0.62
SMG7-215ENST00000515829 MTUS1Q9ULD2 1270 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 FOXR1Q6PIV2 292 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 MSANTD4Q8NCY6 345 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 E9PMD0 336 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 PMS1P54277 932 aaKnown RBP11.2□□□□□ -0.62
SMG7-215ENST00000515829 FAM83BQ5T0W9 1011 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 PLAAQ9Y263 795 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 IFNAR2P48551 515 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 NAA25Q14CX7 972 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 NT5DC1Q5TFE4 455 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 DENND2CQ68D51 928 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 NOVA2Q9UNW9 492 aaKnown RBP11.2□□□□□ -0.62
SMG7-215ENST00000515829 FOXP2O15409 715 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 BUB1BO60566 1050 aaPredicted RBP11.2□□□□□ -0.62
SMG7-215ENST00000515829 GFPT2O94808 682 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 LRRC63Q05C16 580 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 DHX9Q08211 1270 aaKnown RBP11.2□□□□□ -0.62
SMG7-215ENST00000515829 KCNB1Q14721 858 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 MUM1L1Q5H9M0 696 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 STMN4Q9H169 189 aaPredicted RBP11.2□□□□□ -0.62
SMG7-215ENST00000515829 SWAP70Q9UH65 585 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 LCMT1Q9UIC8 334 aa11.2□□□□□ -0.62
SMG7-215ENST00000515829 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.2□□□□□ -0.62
SMG7-215ENST00000515829 JCADQ9P266 1359 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 RGS16O15492 202 aaPredicted RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 GUCY1A3Q02108 690 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 GRM4Q14833 912 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 SEC23AQ15436 765 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 EZH2Q15910 746 aaKnown RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 GLT8D2Q9H1C3 349 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 RHOBTB3O94955 611 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 PLA2G4BP0C869 781 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 ANKRD42Q8N9B4 389 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 NKX2-3Q8TAU0 364 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 RBM17Q96I25 401 aaKnown RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 PSD3Q9NYI0 1048 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 ASIC3Q9UHC3 531 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 RIMBP3CA6NJZ7 1639 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 RIMBP3BA6NNM3 1639 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 RIMBP3Q9UFD9 1639 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 ORC4O43929 436 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 PRPF6O94906 941 aaKnown RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 KRT14P02533 472 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 ICE2Q659A1 982 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 LRP10Q7Z4F1 713 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 UBL4BQ8N7F7 174 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 GIMAP8Q8ND71 665 aaPredicted RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 HSD3B7Q9H2F3 369 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 TARSL2A2RTX5 802 aaKnown RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 SFI1A8K8P3 1242 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 KRT5P13647 590 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 KLRK1P26718 216 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 SNAP25P60880 206 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 PLCB3Q01970 1234 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 SP4Q02446 784 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 GKAP1Q5VSY0 366 aaPredicted RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 ALKBH5Q6P6C2 394 aaKnown RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 LRRC31Q6UY01 552 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 TRAPPC11Q7Z392 1133 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 TMEM139Q8IV31 216 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 JPH2Q9BR39 696 aaPredicted RBP11.19□□□□□ -0.62
SMG7-215ENST00000515829 EFCC1Q9HA90 598 aa11.19□□□□□ -0.62
SMG7-215ENST00000515829 WTIPA6NIX2 430 aaPredicted RBP11.18□□□□□ -0.62
SMG7-215ENST00000515829 PGRMC1O00264 195 aaKnown RBP11.18□□□□□ -0.62
SMG7-215ENST00000515829 LRRN2O75325 713 aa11.18□□□□□ -0.62
SMG7-215ENST00000515829 VPS41P49754 854 aa11.18□□□□□ -0.62
SMG7-215ENST00000515829 PLTPP55058 493 aa11.18□□□□□ -0.62
SMG7-215ENST00000515829 HERVK_113P62684 666 aa11.18□□□□□ -0.62
SMG7-215ENST00000515829 APBA1Q02410 837 aa11.18□□□□□ -0.62
SMG7-215ENST00000515829 PDXDC2PQ6P474 469 aa11.18□□□□□ -0.62
SMG7-215ENST00000515829 RAB17Q9H0T7 212 aa11.18□□□□□ -0.62
SMG7-215ENST00000515829 RBM12Q9NTZ6 932 aaKnown RBP11.18□□□□□ -0.62
SMG7-215ENST00000515829 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms