RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 MAD1L1Q9Y6D9 718 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 TFAMQ00059 246 aaKnown RBP17.41■□□□□ 0.38
TRIM41-207ENST00000515223 NXNQ6DKJ4 435 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 C1orf228Q6PIY5 440 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 FAM71BQ8TC56 605 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 SLC38A10Q9HBR0 1119 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 ASNSP08243 561 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 USP17L8P0C7I0 530 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 NFKBIAP25963 317 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 GYS2P54840 703 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 LMNB2Q03252 620 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.41■□□□□ 0.387e-7■■■■□ 23
TRIM41-207ENST00000515223 ANGPTL3Q9Y5C1 460 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 PLEKHG1Q9ULL1 1385 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 PHLPP2Q6ZVD8 1323 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 MAP3K4Q9Y6R4 1608 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 ATP1A3P13637 1013 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 GNGT1P63211 74 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 MAP3K21Q5TCX8 1036 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 PDXDC2PQ6P474 469 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 ARMCX2Q7L311 632 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 SLC35F6Q8N357 371 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 KCNF1Q9H3M0 494 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 HOMER3Q9NSC5 361 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 STK17AQ9UEE5 414 aa17.41■□□□□ 0.38
TRIM41-207ENST00000515223 SURF1Q15526 300 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 MIGA2Q7L4E1 593 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 NOP9Q86U38 636 aaKnown RBP17.4■□□□□ 0.38
TRIM41-207ENST00000515223 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 ATG3Q9NT62 314 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 EIF3CLB5ME19 914 aaKnown RBP17.4■□□□□ 0.38
TRIM41-207ENST00000515223 THAP12O43422 761 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 CASP14P31944 242 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 SYMPKQ92797 1274 aaKnown RBP17.4■□□□□ 0.38
TRIM41-207ENST00000515223 EIF3CQ99613 913 aaKnown RBP17.4■□□□□ 0.38
TRIM41-207ENST00000515223 ATP7BP35670 1465 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 F8W8V4 182 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 ENC1O14682 589 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 MED7O43513 233 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 SAT1P21673 171 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 SLC16A2P36021 539 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 RASSF2P50749 326 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 TERF2Q15554 542 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 ZMYM1Q5SVZ6 1142 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 RNF139Q8WU17 664 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 CHMP6Q96FZ7 201 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 ATF2P15336 505 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 ECE1P42892 770 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 GUCY2FP51841 1108 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 PHLDB2Q86SQ0 1253 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 C7orf31Q8N865 590 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 ANKRD42Q8N9B4 389 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 LINC00301Q8NCQ3 95 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 RABGGTAQ92696 567 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 HDAC11Q96DB2 347 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 FAM8A1Q9UBU6 413 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 PCK1P35558 622 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 DYNLL1P63167 89 aaKnown RBP17.4■□□□□ 0.38
TRIM41-207ENST00000515223 NAA25Q14CX7 972 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 MTERF2Q49AM1 385 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 SPATA1Q5VX52 437 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 KAZNQ674X7 775 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
TRIM41-207ENST00000515223 CROCC2H7BZ55 1655 aa17.39■□□□□ 0.38
TRIM41-207ENST00000515223 MADDQ8WXG6 1647 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 GNAT1P11488 350 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 NR2F2P24468 414 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 SMYD4Q8IYR2 804 aaPredicted RBP17.39■□□□□ 0.37
TRIM41-207ENST00000515223 WDR64B1ANS9 1081 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 TCP1P17987 556 aaKnown RBP17.39■□□□□ 0.37
TRIM41-207ENST00000515223 ARL4AP40617 200 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 LIG3P49916 1009 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 ATP1A2P50993 1020 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 TOB2Q14106 344 aaPredicted RBP17.39■□□□□ 0.37
TRIM41-207ENST00000515223 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
TRIM41-207ENST00000515223 GOLPH3LQ9H4A5 285 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 ZMYND10O75800 440 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 RBL2Q08999 1139 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 RFX6Q8HWS3 928 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 LMNTD2Q8IXW0 634 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 PARD6BQ9BYG5 372 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 FAN1Q9Y2M0 1017 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 USH1CQ9Y6N9 552 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 SOWAHDA6NJG2 315 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 KCNQ4P56696 695 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 FAM186BQ8IYM0 893 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 METP08581 1390 aa17.39■□□□□ 0.37
TRIM41-207ENST00000515223 SPDYE2BA6NHP3 402 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 PPFIA4O75335 1185 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 SPDYE6P0CI01 402 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 PNMA6AP0CW24 399 aaPredicted RBP17.38■□□□□ 0.37
TRIM41-207ENST00000515223 CCDC13Q8IYE1 715 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 SLITRK6Q9H5Y7 841 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 FBXO40Q9UH90 709 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 STK25O00506 426 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 HOXD10P28358 340 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 CTNNA1P35221 906 aaKnown RBP17.38■□□□□ 0.37
TRIM41-207ENST00000515223 SLC39A14Q15043 492 aa17.38■□□□□ 0.37
TRIM41-207ENST00000515223 RAB44Q7Z6P3 723 aaPredicted RBP17.38■□□□□ 0.37
TRIM41-207ENST00000515223 SIX6OS1Q8N1H7 587 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms