RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 FLRT1Q9NZU1 646 aa8.12□□□□□ -1.11
SMAD1-213ENST00000514778 BIN2Q9UBW5 565 aaPredicted RBP8.12□□□□□ -1.11
SMAD1-213ENST00000514778 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
SMAD1-213ENST00000514778 PCDHA4Q9UN74 947 aa8.12□□□□□ -1.11
SMAD1-213ENST00000514778 Q9Y3F1 56 aa8.12□□□□□ -1.11
SMAD1-213ENST00000514778 ASTN1O14525 1302 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 RBM47A0AV96 593 aaKnown RBP8.11□□□□□ -1.11
SMAD1-213ENST00000514778 GRXCR2A6NFK2 248 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 NKRFO15226 690 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMAD1-213ENST00000514778 SEPT4O43236 478 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 SNAI1O95863 264 aaPredicted RBP8.11□□□□□ -1.11
SMAD1-213ENST00000514778 GJB1P08034 283 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 NR3C2P08235 984 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 CYP3A4P08684 503 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 CYBAP13498 195 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 PDCP20941 246 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 CCND2P30279 289 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 HOXA13P31271 388 aaPredicted RBP8.11□□□□□ -1.11
SMAD1-213ENST00000514778 USP11P51784 963 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 NKX3-2P78367 333 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 CACNB2Q08289 660 aaPredicted RBP8.11□□□□□ -1.11
SMAD1-213ENST00000514778 ACVR2BQ13705 512 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 PGM5Q15124 567 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 CCL14Q16627 93 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 PCNX4Q63HM2 1172 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 USP17L6PQ6QN14 398 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 HSCBQ8IWL3 235 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 BLIDQ8IZY5 108 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 TBC1D5Q92609 795 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 CDHR1Q96JP9 859 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 BRMS1Q9HCU9 246 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 VPS54Q9P1Q0 977 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 COL20A1Q9P218 1284 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 FAM184BQ9ULE4 1060 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 PCDHA6Q9UN73 950 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 PCDHA8Q9Y5H6 950 aa8.11□□□□□ -1.11
SMAD1-213ENST00000514778 RBBP6Q7Z6E9 1792 aaKnown RBP8.11□□□□□ -1.11
SMAD1-213ENST00000514778 M0R2N6 131 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 JAK2O60674 1132 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 RGS20O76081 388 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 MMP1P03956 469 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 ZNF865P0CJ78 1059 aaPredicted RBP8.1□□□□□ -1.11
SMAD1-213ENST00000514778 CCL5P13501 91 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 AKR1A1P14550 325 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 TAL1P17542 331 aaPredicted RBP8.1□□□□□ -1.11
SMAD1-213ENST00000514778 CYP2C19P33261 490 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 SREBF1P36956 1147 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 SAFBQ15424 915 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMAD1-213ENST00000514778 GNPTABQ3T906 1256 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 MOXD1Q6UVY6 613 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 NIPA1Q7RTP0 329 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 KRT25Q7Z3Z0 450 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 FCHSD1Q86WN1 690 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 TNS4Q8IZW8 715 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 ANKLE1Q8NAG6 615 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 FBXO18Q8NFZ0 1043 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 SH3TC2Q8TF17 1288 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 SCFD2Q8WU76 684 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 CRYGNQ8WXF5 182 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 ABHD8Q96I13 439 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 C8orf76Q96K31 380 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 NAP1L4Q99733 375 aaKnown RBP8.1□□□□□ -1.11
SMAD1-213ENST00000514778 KATNBL1Q9H079 304 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMAD1-213ENST00000514778 SMC3Q9UQE7 1217 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 ZSWIM8A7E2V4 1837 aa8.1□□□□□ -1.11
SMAD1-213ENST00000514778 DUSP11O75319 330 aaKnown RBP8.09□□□□□ -1.11
SMAD1-213ENST00000514778 SGPL1O95470 568 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 EIF2AK2P19525 551 aaKnown RBP8.09□□□□□ -1.11
SMAD1-213ENST00000514778 ICAM3P32942 547 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 CIITAP33076 1130 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 KRT2P35908 639 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 GJA8P48165 433 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 PRSS12P56730 875 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 BECN1Q14457 450 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 TTLL4Q14679 1199 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 NPY5RQ15761 445 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 TAPT1Q6NXT6 567 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 NLRX1Q86UT6 975 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 ARRDC4Q8NCT1 418 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 GIMAP8Q8ND71 665 aaPredicted RBP8.09□□□□□ -1.11
SMAD1-213ENST00000514778 GPRASP2Q96D09 838 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 INPP4AQ96PE3 977 aaPredicted RBP8.09□□□□□ -1.11
SMAD1-213ENST00000514778 ANO3Q9BYT9 981 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 RNF208Q9H0X6 261 aa8.09□□□□□ -1.11
SMAD1-213ENST00000514778 FOXP1Q9H334 677 aaPredicted RBP8.09□□□□□ -1.11
SMAD1-213ENST00000514778 DDX20Q9UHI6 824 aaKnown RBP8.09□□□□□ -1.11
SMAD1-213ENST00000514778 CYP3A7-CYP3A51PA0A087WV96 503 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 SPATA31C2B4DYI2 1134 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 FIBPO43427 364 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 RARBP10826 455 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 GCFC2P16383 781 aaKnown RBP8.08□□□□□ -1.12
SMAD1-213ENST00000514778 CYP3A7P24462 503 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 GJB2P29033 226 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 ARHGAP4P98171 946 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 SETQ01105 290 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-213ENST00000514778 TNFAIP2Q03169 654 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 TRIM32Q13049 653 aa8.08□□□□□ -1.12
SMAD1-213ENST00000514778 ORC2Q13416 577 aaPredicted RBP8.08□□□□□ -1.12
SMAD1-213ENST00000514778 NONOQ15233 471 aaKnown RBP eCLIP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms