RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 CELF3Q5SZQ8 465 aaKnown RBP15.4■□□□□ 0.06
PFDN1-206ENST00000514611 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 SAMD3Q8N6K7 520 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 C7orf31Q8N865 590 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 CTCFLQ8NI51 663 aaPredicted RBP15.4■□□□□ 0.06
PFDN1-206ENST00000514611 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 AFAP1L1Q8TED9 768 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 WNT8BQ93098 351 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 SPATA33Q96N06 139 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 SPZ1Q9BXG8 430 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 FTOQ9C0B1 505 aaKnown RBP eCLIP15.4■□□□□ 0.06
PFDN1-206ENST00000514611 PRDM6Q9NQX0 595 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 PCDHA11Q9Y5I1 949 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 MUC3AQ02505 3323 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 CA3P07451 260 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 ACTN1P12814 892 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 HOXD8P13378 290 aaPredicted RBP15.39■□□□□ 0.05
PFDN1-206ENST00000514611 MRPS9P82933 396 aaKnown RBP15.39■□□□□ 0.05
PFDN1-206ENST00000514611 ZNF200P98182 395 aaPredicted RBP15.39■□□□□ 0.05
PFDN1-206ENST00000514611 TRAF1Q13077 416 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 HIC1Q14526 733 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 CREB3L3Q68CJ9 461 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 NFXL1Q6ZNB6 911 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 LRRC8DQ7L1W4 858 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 CMTR1Q8N1G2 835 aaKnown RBP15.39■□□□□ 0.05
PFDN1-206ENST00000514611 CCDC155Q8N6L0 562 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 LRRC2Q9BYS8 371 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 BCAS3Q9H6U6 928 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 ANO2Q9NQ90 1003 aa15.39■□□□□ 0.05
PFDN1-206ENST00000514611 ARHGEF15O94989 841 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 CKBP12277 381 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 SELPP16109 830 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 IGFBP4P22692 258 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 KIF5BP33176 963 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 MCM5P33992 734 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 SEMA3FQ13275 785 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 KCNV1Q6PIU1 500 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 USP17L6PQ6QN14 398 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 SRBD1Q8N5C6 995 aaKnown RBP15.38■□□□□ 0.05
PFDN1-206ENST00000514611 RRP36Q96EU6 259 aaKnown RBP15.38■□□□□ 0.05
PFDN1-206ENST00000514611 SLC9A7Q96T83 725 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 MAP3K14Q99558 947 aa15.38■□□□□ 0.05
PFDN1-206ENST00000514611 CCDC69A6NI79 296 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 NBNO60934 754 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 TGFB3P10600 412 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 RBL2Q08999 1139 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 NECTIN1Q15223 517 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 CCDC85BQ15834 202 aaPredicted RBP15.37■□□□□ 0.05
PFDN1-206ENST00000514611 TCTN1Q2MV58 587 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 TMEM87BQ96K49 555 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 INPP4AQ96PE3 977 aaPredicted RBP15.37■□□□□ 0.05
PFDN1-206ENST00000514611 C16orf70Q9BSU1 422 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 MTA3Q9BTC8 594 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 CERS4Q9HA82 394 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 MLXIPQ9HAP2 919 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 RTEL1Q9NZ71 1219 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 SEC63Q9UGP8 760 aaKnown RBP15.37■□□□□ 0.05
PFDN1-206ENST00000514611 TELO2Q9Y4R8 837 aa15.37■□□□□ 0.05
PFDN1-206ENST00000514611 REV3LO60673 3130 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 hCG_1642624A0A1W2PR95 340 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 MEIS2O14770 477 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 PPFIA4O75335 1185 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 LGALS2P05162 132 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 TRIM71Q2Q1W2 868 aaKnown RBP15.36■□□□□ 0.05
PFDN1-206ENST00000514611 GNPTABQ3T906 1256 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 TRAF7Q6Q0C0 670 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 TMCO2Q7Z6W1 182 aaPredicted RBP15.36■□□□□ 0.05
PFDN1-206ENST00000514611 HERC6Q8IVU3 1022 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 SMARCC2Q8TAQ2 1214 aa15.36■□□□□ 0.05
PFDN1-206ENST00000514611 BAZ2BQ9UIF8 2168 aaKnown RBP15.36■□□□□ 0.05
PFDN1-206ENST00000514611 EPOPA6NHQ4 379 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 RFXAPO00287 272 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 PIK3CDO00329 1044 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 BAIAP3O94812 1187 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 CXCL10P02778 98 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 ICAM3P32942 547 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 LIFRP42702 1097 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 WDR5P61964 334 aaKnown RBP15.35■□□□□ 0.05
PFDN1-206ENST00000514611 DEFB103AP81534 67 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 PTK7Q13308 1070 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 MBTPS1Q14703 1052 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 BMP2KLQ5H9B9 411 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 ZNF618Q5T7W0 954 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 CYFIP1Q7L576 1253 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 SPRED2Q7Z698 418 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 MICU3Q86XE3 530 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 TRIM50Q86XT4 487 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 MICALL1Q8N3F8 863 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 CCDC82Q8N4S0 544 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 PHOSPHO2Q8TCD6 241 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 CUL5Q93034 780 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 LZTS2Q9BRK4 669 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 SLC12A7Q9Y666 1083 aa15.35■□□□□ 0.05
PFDN1-206ENST00000514611 SPATA31C2B4DYI2 1134 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 NOP56O00567 594 aaKnown RBP15.34■□□□□ 0.05
PFDN1-206ENST00000514611 FIBPO43427 364 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 STAM2O75886 525 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
PFDN1-206ENST00000514611 KCNJ6P48051 423 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms