RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CRYMQ14894 314 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 MAN2A1Q16706 1144 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 GNPTABQ3T906 1256 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 ADAT2Q7Z6V5 191 aaKnown RBP12.25□□□□□ -0.45
TCOF1-211ENST00000513346 MAIP1Q8WWC4 291 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 OSBPL9Q96SU4 736 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 PSMD1Q99460 953 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 SLC39A2Q9NP94 309 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 KIDINS220Q9ULH0 1771 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 ZBED4O75132 1171 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 BBOX1O75936 387 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 MYCLP12524 364 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-211ENST00000513346 PDE6CP51160 858 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 PLTPP55058 493 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 IRX4P78413 519 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 LRRN4CLQ8ND94 238 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 SPATA4Q8NEY3 305 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 FMO2Q99518 471 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 BZW2Q9Y6E2 419 aaKnown RBP12.25□□□□□ -0.45
TCOF1-211ENST00000513346 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 SH2B2O14492 632 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-211ENST00000513346 PPP1R12AO14974 1030 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-211ENST00000513346 SASH3O75995 380 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 BAG2O95816 211 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 MYL1P05976 194 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 CCNE1P24864 410 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 WDR93Q6P2C0 686 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 REXO1Q8N1G1 1221 aaKnown RBP12.25□□□□□ -0.45
TCOF1-211ENST00000513346 IL25Q9H293 177 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 CUEDC2Q9H467 287 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 HAUS2Q9NVX0 235 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
TCOF1-211ENST00000513346 ERVV-1B6SEH8 477 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 LSP1P33241 339 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 C6orf118Q5T5N4 469 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 METTL16Q86W50 562 aaKnown RBP12.25□□□□□ -0.45
TCOF1-211ENST00000513346 SH2D3CQ8N5H7 860 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 TBC1D7Q9P0N9 293 aa12.25□□□□□ -0.45
TCOF1-211ENST00000513346 ABCB4P21439 1286 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 MAGOHP61326 146 aaKnown RBP12.24□□□□□ -0.45
TCOF1-211ENST00000513346 NR1I3Q14994 352 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 MAGOHBQ96A72 148 aaKnown RBP12.24□□□□□ -0.45
TCOF1-211ENST00000513346 FERMT1Q9BQL6 677 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 FAM167BQ9BTA0 163 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 LRRC1Q9BTT6 524 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 USH1CQ9Y6N9 552 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 CRB1P82279 1406 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 TTC26A0AVF1 554 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 CCDC188H7C350 402 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 THAP12O43422 761 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 CFAP61Q8NHU2 1237 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 LRRC8CQ8TDW0 803 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 CD248Q9HCU0 757 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 SLC40A1Q9NP59 571 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 XDHP47989 1333 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 BTDP43251 543 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 ARHGEF18Q6ZSZ5 1173 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 CHMP6Q96FZ7 201 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 PUS7LQ9H0K6 701 aaKnown RBP12.24□□□□□ -0.45
TCOF1-211ENST00000513346 SRP68Q9UHB9 627 aaKnown RBP12.24□□□□□ -0.45
TCOF1-211ENST00000513346 LEMD3Q9Y2U8 911 aa12.24□□□□□ -0.45
TCOF1-211ENST00000513346 RASGRF2O14827 1237 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 RNASELQ05823 741 aaKnown RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 HLFQ16534 295 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CLEC4GQ6UXB4 293 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 DEFB132Q7Z7B7 95 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 TTLL11Q8NHH1 800 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 ZSCAN10Q96SZ4 725 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 IRAK4Q9NWZ3 460 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 ARHGEF35A5YM69 484 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CREB3O43889 395 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 SCG2P13521 617 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CPS1P31327 1500 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 DYNC1I2Q13409 638 aaKnown RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CALCRLQ16602 461 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 INF2Q27J81 1249 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CCDC93Q567U6 631 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 HSP90AA5PQ58FG0 334 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 PASKQ96RG2 1323 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 ZMYND12Q9H0C1 365 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 SPON1Q9HCB6 807 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 KCND1Q9NSA2 647 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 TYW1Q9NV66 732 aaKnown RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CEP170BQ9Y4F5 1589 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 USP42Q9H9J4 1324 aaKnown RBP12.23□□□□□ -0.45
TCOF1-211ENST00000513346 ESYT3A0FGR9 886 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 RASSF10A6NK89 507 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 I3L4J1 428 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 SMTNP53814 917 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 ADCY2Q08462 1091 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 NUGGCQ68CJ6 796 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 NFRKBQ6P4R8 1299 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
TCOF1-211ENST00000513346 CHURC1Q8WUH1 139 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms