RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 SENP2Q9HC62 589 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 CABP5Q9NP86 173 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 DDX4Q9NQI0 724 aaKnown RBP10.73□□□□□ -0.69
MSH3-203ENST00000512531 KCNJ14Q9UNX9 436 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 HPSEQ9Y251 543 aa10.73□□□□□ -0.69
MSH3-203ENST00000512531 DOCK3Q8IZD9 2030 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 KIF2AO00139 706 aaPredicted RBP10.72□□□□□ -0.69
MSH3-203ENST00000512531 HMGCRP04035 888 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 TUBB4AP04350 444 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 PARP1P09874 1014 aaKnown RBP10.72□□□□□ -0.69
MSH3-203ENST00000512531 TOP1P11387 765 aaKnown RBP10.72□□□□□ -0.69
MSH3-203ENST00000512531 ELNP15502 786 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 NOLC1Q14978 699 aaKnown RBP eCLIP10.72□□□□□ -0.69
MSH3-203ENST00000512531 IQCB1Q15051 598 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 TTC38Q5R3I4 469 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 ARL6IP4Q66PJ3 421 aaKnown RBP10.72□□□□□ -0.69
MSH3-203ENST00000512531 LYPD8Q6UX82 237 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 MAMSTRQ6ZN01 415 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 C16orf86Q6ZW13 317 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 SPC24Q8NBT2 197 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 ZNF280CQ8ND82 737 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 ANKRD20A12PQ8NF67 263 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 SH3RF3Q8TEJ3 882 aaPredicted RBP10.72□□□□□ -0.69
MSH3-203ENST00000512531 AIFM3Q96NN9 605 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 DEFB118Q96PH6 123 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.72□□□□□ -0.69
MSH3-203ENST00000512531 GINM1Q9NU53 330 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 RMND1Q9NWS8 449 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 MORF4L1Q9UBU8 362 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 HERC5Q9UII4 1024 aaKnown RBP10.72□□□□□ -0.69
MSH3-203ENST00000512531 TUBE1Q9UJT0 475 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 CNTNAP5Q8WYK1 1306 aa10.72□□□□□ -0.69
MSH3-203ENST00000512531 CYP2D7A0A087X1C5 515 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 CAP2P40123 477 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 MYL5Q02045 173 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 POSTNQ15063 836 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 FAM47AQ5JRC9 791 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 VARS2Q5ST30 1063 aaKnown RBP10.71□□□□□ -0.69
MSH3-203ENST00000512531 TRMT44Q8IYL2 757 aaKnown RBP10.71□□□□□ -0.69
MSH3-203ENST00000512531 BLIDQ8IZY5 108 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 RPTORQ8N122 1335 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 AOPEPQ8N6M6 819 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 ANKRD13CQ8N6S4 541 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 IQUBQ8NA54 791 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 NEDD1Q8NHV4 660 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 RRP36Q96EU6 259 aaKnown RBP10.71□□□□□ -0.69
MSH3-203ENST00000512531 GDF15Q99988 308 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 WDR18Q9BV38 432 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 GLT8D2Q9H1C3 349 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSH3-203ENST00000512531 AS3MTQ9HBK9 375 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 C6orf50Q9HD87 102 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 VPS54Q9P1Q0 977 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 GJD2Q9UKL4 321 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 PCDHA4Q9UN74 947 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 STX8Q9UNK0 236 aa10.71□□□□□ -0.69
MSH3-203ENST00000512531 LOC285556D6RIA3 1793 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 USP17L5A8MUK1 530 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 SERPINC1P01008 464 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 MYL1P05976 194 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 XRCC5P13010 732 aaKnown RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 ATP2B1P20020 1258 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 HOXA7P31268 230 aaPredicted RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 GUCY1A2P33402 732 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 LONP1P36776 959 aaKnown RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 NR1H3Q13133 447 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 ASPRV1Q53RT3 343 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 TREML2Q5T2D2 321 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 DESI1Q6ICB0 168 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 SHC4Q6S5L8 630 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 KRT25Q7Z3Z0 450 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 MTERF4Q7Z6M4 381 aaKnown RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 MAPKAPK5Q8IW41 473 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 DAGLBQ8NCG7 672 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 CCDC112Q8NEF3 446 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 FAM174AQ8TBP5 190 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 STK32AQ8WU08 396 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 GTF3C2Q8WUA4 911 aaPredicted RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 PAWRQ96IZ0 340 aaKnown RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 NAP1L4Q99733 375 aaKnown RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 SPZ1Q9BXG8 430 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 DHX36Q9H2U1 1008 aaKnown RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 GJB4Q9NTQ9 266 aa10.7□□□□□ -0.7
MSH3-203ENST00000512531 FBXO2Q9UK22 296 aaPredicted RBP10.7□□□□□ -0.7
MSH3-203ENST00000512531 FLT1P17948 1338 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 C19orf81C9J6K1 198 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 SNPHO15079 494 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 POLR2DO15514 142 aaKnown RBP10.69□□□□□ -0.7
MSH3-203ENST00000512531 ACTN4O43707 911 aaKnown RBP10.69□□□□□ -0.7
MSH3-203ENST00000512531 RNF40O75150 1001 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 PLEKHA8P1O95397 391 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 F12P00748 615 aaPredicted RBP10.69□□□□□ -0.7
MSH3-203ENST00000512531 CDK11BP21127 795 aaKnown RBP10.69□□□□□ -0.7
MSH3-203ENST00000512531 CDK8P49336 464 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 SPP2Q13103 211 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 PICALMQ13492 652 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 PKN1Q16512 942 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 MAP3K21Q5TCX8 1036 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 C11orf57Q6ZUT1 292 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms