RNA–Protein interactions for RNA: ENST00000512153.5

COPB2-208, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-208ENST00000512153 ECHDC1Q9NTX5 307 aa12.52□□□□□ -0.41
COPB2-208ENST00000512153 PTPRSQ13332 1948 aa12.52□□□□□ -0.41
COPB2-208ENST00000512153 CACNA1AO00555 2505 aa12.52□□□□□ -0.41
COPB2-208ENST00000512153 TECTAO75443 2155 aa12.52□□□□□ -0.41
COPB2-208ENST00000512153 RBAK-RBAKDNI3L0D1 243 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 ZNF286BP0CG31 522 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 ZXDAP98168 799 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 LAMC2Q13753 1193 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 COL19A1Q14993 1142 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 USH1GQ495M9 461 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 PLEKHG4Q58EX7 1191 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 BTNL9Q6UXG8 535 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
COPB2-208ENST00000512153 WNT8BQ93098 351 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 LMAN2LQ9H0V9 348 aa12.51□□□□□ -0.41
COPB2-208ENST00000512153 SMARCA5O60264 1052 aaPredicted RBP12.5□□□□□ -0.41
COPB2-208ENST00000512153 RB1P06400 928 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 BMPR1AP36894 532 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 CTDSPL2Q05D32 466 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 CTC1Q2NKJ3 1217 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 TRIM71Q2Q1W2 868 aaKnown RBP12.5□□□□□ -0.41
COPB2-208ENST00000512153 TRAF7Q6Q0C0 670 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 ATP6V0A1Q93050 837 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 INCENPQ9NQS7 918 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 RWDD3Q9Y3V2 267 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 MRVI1Q9Y6F6 885 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 CACNA1HO95180 2353 aa12.5□□□□□ -0.41
COPB2-208ENST00000512153 C17orf102A2RUQ5 167 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 H0Y858 1186 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 GRM6O15303 877 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 TOP1P11387 765 aaKnown RBP12.49□□□□□ -0.41
COPB2-208ENST00000512153 MS4A1P11836 297 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 AVPR2P30518 371 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 GTF2F1P35269 517 aaKnown RBP eCLIP12.49□□□□□ -0.41
COPB2-208ENST00000512153 ARHGEF16Q5VV41 709 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 SIRT2Q8IXJ6 389 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 PPTC7Q8NI37 304 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 TAAR1Q96RJ0 339 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 RMDN3Q96TC7 470 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 TLR9Q9NR96 1032 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 DDX41Q9UJV9 622 aaKnown RBP12.49□□□□□ -0.41
COPB2-208ENST00000512153 SPTBN4Q9H254 2564 aa12.49□□□□□ -0.41
COPB2-208ENST00000512153 LINC01565O15544 149 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 SORBS3O60504 671 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 KDM4AO75164 1064 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 PPFIA4O75335 1185 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 F2P00734 622 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 CTSHP09668 335 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 SIGLEC14Q08ET2 396 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 ADAM15Q13444 863 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
COPB2-208ENST00000512153 ZBTB33Q86T24 672 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 SERINC5Q86VE9 423 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 RGS22Q8NE09 1264 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 RPGRIP1Q96KN7 1286 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 SPATA33Q96N06 139 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 IWS1Q96ST2 819 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 SEC62Q99442 399 aaKnown RBP12.48□□□□□ -0.41
COPB2-208ENST00000512153 RIF1Q5UIP0 2472 aaKnown RBP12.48□□□□□ -0.41
COPB2-208ENST00000512153 CFAP54Q96N23 3096 aa12.48□□□□□ -0.41
COPB2-208ENST00000512153 MYH7P12883 1935 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 C5orf67F2Z3F1 127 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 HAS3O00219 553 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 TBX10O75333 385 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 EIF3JO75822 258 aaKnown RBP12.47□□□□□ -0.41
COPB2-208ENST00000512153 EIF2AK2P19525 551 aaKnown RBP12.47□□□□□ -0.41
COPB2-208ENST00000512153 VCPP55072 806 aaKnown RBP12.47□□□□□ -0.41
COPB2-208ENST00000512153 MCF2L2Q86YR7 1114 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 APBB2Q92870 758 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 TMEM47Q9BQJ4 181 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
COPB2-208ENST00000512153 ALG13Q9NP73 1137 aaKnown RBP12.47□□□□□ -0.41
COPB2-208ENST00000512153 DDX19BQ9UMR2 479 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
COPB2-208ENST00000512153 TRIOO75962 3097 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 LCTP09848 1927 aa12.47□□□□□ -0.41
COPB2-208ENST00000512153 MICAL3Q7RTP6 2002 aa12.46□□□□□ -0.41
COPB2-208ENST00000512153 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.46□□□□□ -0.41
COPB2-208ENST00000512153 PDHBP11177 359 aa12.46□□□□□ -0.41
COPB2-208ENST00000512153 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
COPB2-208ENST00000512153 BTG3Q14201 252 aaPredicted RBP12.46□□□□□ -0.41
COPB2-208ENST00000512153 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
COPB2-208ENST00000512153 ERMP1Q7Z2K6 904 aa12.46□□□□□ -0.41
COPB2-208ENST00000512153 SYTL5Q8TDW5 730 aaPredicted RBP12.46□□□□□ -0.41
COPB2-208ENST00000512153 TBC1D5Q92609 795 aa12.46□□□□□ -0.41
COPB2-208ENST00000512153 EMID1Q96A84 441 aaPredicted RBP12.46□□□□□ -0.41
COPB2-208ENST00000512153 FSD1Q9BTV5 496 aa12.46□□□□□ -0.41
COPB2-208ENST00000512153 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
COPB2-208ENST00000512153 USP34Q70CQ2 3546 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 LOC730098B7Z3J9 87 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 TREHO43280 583 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 EYA4O95677 639 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 NR3C2P08235 984 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 GNAT1P11488 350 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 MYCLP12524 364 aaPredicted RBP12.45□□□□□ -0.42
COPB2-208ENST00000512153 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 HIC1Q14526 733 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
COPB2-208ENST00000512153 RBM23Q86U06 439 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms