RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 GJC2Q5T442 439 aaPredicted RBP6.19□□□□□ -1.42
PROM1-211ENST00000511153 ARHGEF16Q5VV41 709 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 LARP1BQ659C4 914 aaKnown RBP6.19□□□□□ -1.42
PROM1-211ENST00000511153 PIK3AP1Q6ZUJ8 805 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 FBXO16Q8IX29 292 aaPredicted RBP6.19□□□□□ -1.42
PROM1-211ENST00000511153 GTF3C2Q8WUA4 911 aaPredicted RBP6.19□□□□□ -1.42
PROM1-211ENST00000511153 PPP1R13LQ8WUF5 828 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 CUL5Q93034 780 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 GJA10Q969M2 543 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 FGD4Q96M96 766 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 ARID3AQ99856 593 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 NUDT12Q9BQG2 462 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 MROH8Q9H579 483 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.19□□□□□ -1.42
PROM1-211ENST00000511153 MYH7BA7E2Y1 1941 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 DOCK5Q9H7D0 1870 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 STK36Q9NRP7 1315 aa6.19□□□□□ -1.42
PROM1-211ENST00000511153 CNGA1P29973 690 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 RCAN1P53805 252 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 OAZ1P54368 228 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 SP4Q02446 784 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 CEBPZQ03701 1054 aaKnown RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 GRB14Q14449 540 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 PPP2R5BQ15173 497 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 INF2Q27J81 1249 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 MORN1Q5T089 497 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 THSD4Q6ZMP0 1018 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 SEPT14Q6ZU15 432 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 DIS3L2Q8IYB7 885 aaKnown RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 BLIDQ8IZY5 108 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 CHST13Q8NET6 341 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 CYP2W1Q8TAV3 490 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 TRIB2Q92519 343 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 RMDN3Q96TC7 470 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 C6orf50Q9HD87 102 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 PDGFCQ9NRA1 345 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 SRRDQ9UH36 339 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 GJD2Q9UKL4 321 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 ZHX1Q9UKY1 873 aaPredicted RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 PCDHGC3Q9UN70 934 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 PCDHA6Q9UN73 950 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 PCDHA8Q9Y5H6 950 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 BRCA2P51587 3418 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 SLC15A5A6NIM6 579 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 SPDYE3A6NKU9 549 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 DDX39AO00148 427 aaKnown RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 ATP2A1O14983 1001 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 HOXA2O43364 376 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 ADCY3O60266 1144 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 FDX1P10109 184 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 SYT1P21579 422 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 SMARCA1P28370 1054 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 CCND3P30281 292 aaPredicted RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 KRT2P35908 639 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 RGS2P41220 211 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 ALDH5A1P51649 535 aaPredicted RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 MRPL12P52815 198 aaKnown RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 CHMP4BP1P59074 171 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 HMGN5P82970 282 aaKnown RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 NPY5RQ15761 445 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 QPCTQ16769 361 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 ZNF792Q3KQV3 632 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 TKFCQ3LXA3 575 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 MCF2L2Q86YR7 1114 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 REXO1Q8N1G1 1221 aaKnown RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 SHCBP1Q8NEM2 672 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 TRPV1Q8NER1 839 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 WASF1Q92558 559 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 SYMPKQ92797 1274 aaKnown RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 COPS5Q92905 334 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 MAML3Q96JK9 1138 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 LLPHQ9BRT6 129 aaKnown RBP6.18□□□□□ -1.42
PROM1-211ENST00000511153 PHF20Q9BVI0 1012 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 ANO3Q9BYT9 981 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 FTOQ9C0B1 505 aaKnown RBP eCLIP6.18□□□□□ -1.42
PROM1-211ENST00000511153 BCAS3Q9H6U6 928 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 RIC8AQ9NPQ8 531 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 PXMP2Q9NR77 195 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 PCDHA4Q9UN74 947 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 TELO2Q9Y4R8 837 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 MRVI1Q9Y6F6 885 aa6.18□□□□□ -1.42
PROM1-211ENST00000511153 KIAA1217Q5T5P2 1943 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 PFASO15067 1338 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 CCDC194A0A1B0GVG4 234 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.17□□□□□ -1.42
PROM1-211ENST00000511153 TDP2O95551 362 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 MMP1P03956 469 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 INHAP05111 366 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 XBP1P17861 261 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 ZNF76P36508 570 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 CLK2P49760 499 aaKnown RBP6.17□□□□□ -1.42
PROM1-211ENST00000511153 HSD17B4P51659 736 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 MTFR1Q15390 333 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 ZNF174Q15697 407 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 LETM2Q2VYF4 491 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 ARMCX2Q7L311 632 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 SPNS2Q8IVW8 549 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 FAM133AQ8N9E0 248 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 CCDC148Q8NFR7 591 aa6.17□□□□□ -1.42
PROM1-211ENST00000511153 TBCKQ8TEA7 893 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms