RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 IFIT1BQ5T764 474 aaKnown RBP26.59■■□□□ 1.85
SMAD5-207ENST00000511116 MYSM1Q5VVJ2 828 aa26.59■■□□□ 1.85
SMAD5-207ENST00000511116 C7orf31Q8N865 590 aa26.59■■□□□ 1.85
SMAD5-207ENST00000511116 NECAB3Q96P71 396 aaPredicted RBP26.59■■□□□ 1.85
SMAD5-207ENST00000511116 IL25Q9H293 177 aa26.59■■□□□ 1.85
SMAD5-207ENST00000511116 LMCD1Q9NZU5 365 aa26.59■■□□□ 1.85
SMAD5-207ENST00000511116 MAD2L2Q9UI95 211 aa26.59■■□□□ 1.85
SMAD5-207ENST00000511116 PALM3A6NDB9 673 aaPredicted RBP26.58■■□□□ 1.85
SMAD5-207ENST00000511116 KLRF2D3W0D1 207 aa26.58■■□□□ 1.85
SMAD5-207ENST00000511116 ZBTB5O15062 677 aa26.58■■□□□ 1.85
SMAD5-207ENST00000511116 PPFIA4O75335 1185 aa26.58■■□□□ 1.85
SMAD5-207ENST00000511116 GJB5O95377 273 aa26.58■■□□□ 1.85
SMAD5-207ENST00000511116 SLC35G1Q2M3R5 365 aa26.58■■□□□ 1.85
SMAD5-207ENST00000511116 KCNV1Q6PIU1 500 aa26.58■■□□□ 1.85
SMAD5-207ENST00000511116 VSIG10LQ86VR7 867 aa26.58■■□□□ 1.85
SMAD5-207ENST00000511116 DHX37Q8IY37 1157 aaKnown RBP26.58■■□□□ 1.85
SMAD5-207ENST00000511116 WNT8BQ93098 351 aa26.58■■□□□ 1.85
SMAD5-207ENST00000511116 EFCAB14O75071 495 aa26.57■■□□□ 1.84
SMAD5-207ENST00000511116 ZNF286BP0CG31 522 aa26.57■■□□□ 1.84
SMAD5-207ENST00000511116 MKRN4PQ13434 485 aaPredicted RBP26.57■■□□□ 1.84
SMAD5-207ENST00000511116 MBTPS1Q14703 1052 aa26.57■■□□□ 1.84
SMAD5-207ENST00000511116 SKIV2LQ15477 1246 aaKnown RBP26.57■■□□□ 1.84
SMAD5-207ENST00000511116 CELF3Q5SZQ8 465 aaKnown RBP26.57■■□□□ 1.84
SMAD5-207ENST00000511116 TGFB3P10600 412 aa26.56■■□□□ 1.84
SMAD5-207ENST00000511116 HOXC8P31273 242 aa26.56■■□□□ 1.84
SMAD5-207ENST00000511116 HIC1Q14526 733 aa26.56■■□□□ 1.84
SMAD5-207ENST00000511116 PGM5Q15124 567 aa26.56■■□□□ 1.84
SMAD5-207ENST00000511116 CYB5R4Q7L1T6 521 aa26.56■■□□□ 1.84
SMAD5-207ENST00000511116 RAD9AQ99638 391 aa26.56■■□□□ 1.84
SMAD5-207ENST00000511116 ALG1Q9BT22 464 aa26.56■■□□□ 1.84
SMAD5-207ENST00000511116 PCDHA1Q9Y5I3 950 aa26.56■■□□□ 1.84
SMAD5-207ENST00000511116 HSDL1Q3SXM5 330 aa26.55■■□□□ 1.84
SMAD5-207ENST00000511116 ZNF618Q5T7W0 954 aa26.55■■□□□ 1.84
SMAD5-207ENST00000511116 TMCO2Q7Z6W1 182 aaPredicted RBP26.55■■□□□ 1.84
SMAD5-207ENST00000511116 IL31RAQ8NI17 732 aa26.55■■□□□ 1.84
SMAD5-207ENST00000511116 RIOX1Q9H6W3 641 aa26.55■■□□□ 1.84
SMAD5-207ENST00000511116 ERVK-21P61565 698 aa26.54■■□□□ 1.84
SMAD5-207ENST00000511116 SP2Q02086 613 aa26.54■■□□□ 1.84
SMAD5-207ENST00000511116 SERINC5Q86VE9 423 aa26.54■■□□□ 1.84
SMAD5-207ENST00000511116 HLA-CQ95604 372 aa26.54■■□□□ 1.84
SMAD5-207ENST00000511116 C16orf70Q9BSU1 422 aa26.54■■□□□ 1.84
SMAD5-207ENST00000511116 BAZ2BQ9UIF8 2168 aaKnown RBP26.53■■□□□ 1.84
SMAD5-207ENST00000511116 UBA1P22314 1058 aaKnown RBP26.53■■□□□ 1.84
SMAD5-207ENST00000511116 ZNF200P98182 395 aaPredicted RBP26.53■■□□□ 1.84
SMAD5-207ENST00000511116 IKBKEQ14164 716 aa26.53■■□□□ 1.84
SMAD5-207ENST00000511116 SPATA33Q96N06 139 aa26.53■■□□□ 1.84
SMAD5-207ENST00000511116 ZBED2Q9BTP6 218 aa26.53■■□□□ 1.84
SMAD5-207ENST00000511116 SIP14410 1827 aa26.53■■□□□ 1.84
SMAD5-207ENST00000511116 GGPS1O95749 300 aa26.52■■□□□ 1.84
SMAD5-207ENST00000511116 MYCLP12524 364 aaPredicted RBP26.52■■□□□ 1.84
SMAD5-207ENST00000511116 HOXA13P31271 388 aaPredicted RBP26.52■■□□□ 1.84
SMAD5-207ENST00000511116 TRAF1Q13077 416 aa26.52■■□□□ 1.84
SMAD5-207ENST00000511116 GRM4Q14833 912 aa26.52■■□□□ 1.84
SMAD5-207ENST00000511116 FRMPD4Q14CM0 1322 aa26.52■■□□□ 1.84
SMAD5-207ENST00000511116 MICAL3Q7RTP6 2002 aa26.51■■□□□ 1.83
SMAD5-207ENST00000511116 EMSYQ7Z589 1322 aa26.51■■□□□ 1.83
SMAD5-207ENST00000511116 LINC01553A4QN01 128 aa26.51■■□□□ 1.83
SMAD5-207ENST00000511116 LGR5O75473 907 aa26.51■■□□□ 1.83
SMAD5-207ENST00000511116 GDPD5Q8WTR4 605 aa26.51■■□□□ 1.83
SMAD5-207ENST00000511116 TGS1Q96RS0 853 aaKnown RBP26.51■■□□□ 1.83
SMAD5-207ENST00000511116 C1QTNF1Q9BXJ1 281 aa26.51■■□□□ 1.83
SMAD5-207ENST00000511116 SUGCTQ9HAC7 445 aa26.51■■□□□ 1.83
SMAD5-207ENST00000511116 CYTH3O43739 400 aa26.5■■□□□ 1.83
SMAD5-207ENST00000511116 CCND2P30279 289 aa26.5■■□□□ 1.83
SMAD5-207ENST00000511116 RAPGEFL1Q9UHV5 662 aa26.5■■□□□ 1.83
SMAD5-207ENST00000511116 GCOM1H8Y6P7 765 aaPredicted RBP26.49■■□□□ 1.83
SMAD5-207ENST00000511116 POLR2MP0CAP2 368 aa26.49■■□□□ 1.83
SMAD5-207ENST00000511116 TROAPQ12815 778 aa26.49■■□□□ 1.83
SMAD5-207ENST00000511116 EXOC6Q8TAG9 804 aa26.49■■□□□ 1.83
SMAD5-207ENST00000511116 GPKOWQ92917 476 aaPredicted RBP eCLIP26.49■■□□□ 1.83
SMAD5-207ENST00000511116 PIGSQ96S52 555 aa26.49■■□□□ 1.83
SMAD5-207ENST00000511116 CYP21A2P08686 494 aa26.48■■□□□ 1.83
SMAD5-207ENST00000511116 GSPT1P15170 499 aaKnown RBP26.48■■□□□ 1.83
SMAD5-207ENST00000511116 ICAM3P32942 547 aa26.48■■□□□ 1.83
SMAD5-207ENST00000511116 HTRA4P83105 476 aaPredicted RBP26.48■■□□□ 1.83
SMAD5-207ENST00000511116 PLEKHG4Q58EX7 1191 aa26.48■■□□□ 1.83
SMAD5-207ENST00000511116 SP7Q8TDD2 431 aaPredicted RBP26.48■■□□□ 1.83
SMAD5-207ENST00000511116 INPP4AQ96PE3 977 aaPredicted RBP26.48■■□□□ 1.83
SMAD5-207ENST00000511116 PNMA6FA0A0J9YX94 578 aa26.47■■□□□ 1.83
SMAD5-207ENST00000511116 H3BRB1 525 aa26.47■■□□□ 1.83
SMAD5-207ENST00000511116 MRPS9P82933 396 aaKnown RBP26.47■■□□□ 1.83
SMAD5-207ENST00000511116 HOMER1Q86YM7 354 aa26.47■■□□□ 1.83
SMAD5-207ENST00000511116 DBF4BQ8NFT6 615 aa26.47■■□□□ 1.83
SMAD5-207ENST00000511116 TUT1Q9H6E5 874 aaKnown RBP26.47■■□□□ 1.83
SMAD5-207ENST00000511116 SENP2Q9HC62 589 aa26.47■■□□□ 1.83
SMAD5-207ENST00000511116 INSL6Q9Y581 213 aa26.47■■□□□ 1.83
SMAD5-207ENST00000511116 COL4A6Q14031 1691 aa26.47■■□□□ 1.83
SMAD5-207ENST00000511116 RSPH10B2B2RC85 870 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 RBAK-RBAKDNI3L0D1 243 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 CAND2O75155 1236 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 STAM2O75886 525 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 LGALS2P05162 132 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 RSPH10BP0C881 870 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 PDE4AP27815 886 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 TRDNQ13061 729 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.46■■□□□ 1.83
SMAD5-207ENST00000511116 BCAS3Q9H6U6 928 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 MLXIPQ9HAP2 919 aa26.46■■□□□ 1.83
SMAD5-207ENST00000511116 U3KPZ7 1027 aaPredicted RBP26.46■■□□□ 1.83
SMAD5-207ENST00000511116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms