RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 IL23AQ9NPF7 189 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
UBE2D3-228ENST00000508974 MEIS2O14770 477 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 SMAD3P84022 425 aaKnown RBP17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 HSDL1Q3SXM5 330 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 TSGA10IPQ3SY00 556 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 CELF3Q5SZQ8 465 aaKnown RBP17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 MYSM1Q5VVJ2 828 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 PSRC1Q6PGN9 363 aaPredicted RBP17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 DEFB128Q7Z7B8 93 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 PPTC7Q8NI37 304 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 SPATA33Q96N06 139 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 PSTPIP2Q9H939 334 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 MLXIPQ9HAP2 919 aa17.05■□□□□ 0.32
UBE2D3-228ENST00000508974 FRMPD4Q14CM0 1322 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 GRXCR1A8MXD5 290 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 HSPA4P34932 840 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 PSEN2P49810 448 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 APOBRQ0VD83 1088 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 PTGISQ16647 500 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 GNPTABQ3T906 1256 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 GDF6Q6KF10 455 aaPredicted RBP17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 KCNV1Q6PIU1 500 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 Q6ZUG5 572 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 OTOP2Q7RTS6 562 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 EMID1Q96A84 441 aaPredicted RBP17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 GUCD1Q96NT3 240 aa17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 RBM28Q9NW13 759 aaKnown RBP17.04■□□□□ 0.32
UBE2D3-228ENST00000508974 CDH23Q9H251 3354 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 RBAK-RBAKDNI3L0D1 243 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 FGBP02675 491 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 SP4Q02446 784 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 MFSD10Q14728 455 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 KIAA0753Q2KHM9 967 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 WWC2Q6AWC2 1192 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 BLOC1S2Q6QNY1 142 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 C7orf31Q8N865 590 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 BRF1Q92994 677 aa17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 CXXC1Q9P0U4 656 aaPredicted RBP17.03■□□□□ 0.32
UBE2D3-228ENST00000508974 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 PIK3CDO00329 1044 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 REC8O95072 547 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 CDC27P30260 824 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 NAPAP54920 295 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 PTPN11Q06124 597 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 SEMA3FQ13275 785 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 PCNX4Q63HM2 1172 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 INPP4AQ96PE3 977 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 TTYH1Q9H313 450 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 HDAC6Q9UBN7 1215 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 TELO2Q9Y4R8 837 aa17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 V9GY48 417 aaPredicted RBP17.02■□□□□ 0.32
UBE2D3-228ENST00000508974 ZBBXA8MT70 800 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 NOP56O00567 594 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 FIBPO43427 364 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 F2P00734 622 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 TGFB3P10600 412 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 DNAJB2P25686 324 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 PBX2P40425 430 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 METAP2P50579 478 aaKnown RBP eCLIP17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 RETREG2Q8NC44 543 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 KCNB2Q92953 911 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 PGBD1Q96JS3 809 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 KATNAL1Q9BW62 490 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 SEMA6BQ9H3T3 888 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 PKD2L1Q9P0L9 805 aa17.01■□□□□ 0.31
UBE2D3-228ENST00000508974 SPDYE3A6NKU9 549 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 SPATA31C2B4DYI2 1134 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 PPFIA3O75145 1194 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 STAM2O75886 525 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 RPS6KB1P23443 525 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 ADD1P35611 737 aaKnown RBP17■□□□□ 0.31
UBE2D3-228ENST00000508974 ZNF200P98182 395 aaPredicted RBP17■□□□□ 0.31
UBE2D3-228ENST00000508974 FUT2Q10981 343 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 BFSP2Q13515 415 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 RASIP1Q5U651 963 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 RPUSD2Q8IZ73 545 aaKnown RBP17■□□□□ 0.31
UBE2D3-228ENST00000508974 HERVK_113Q902F9 699 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 VWCEQ96DN2 955 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 FAM217BQ9NTX9 383 aaPredicted RBP17■□□□□ 0.31
UBE2D3-228ENST00000508974 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 GTF2IRD1Q9UHL9 959 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 PCDHA6Q9UN73 950 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 STXBP5LQ9Y2K9 1186 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 PCDHA8Q9Y5H6 950 aa17■□□□□ 0.31
UBE2D3-228ENST00000508974 PPFIA4O75335 1185 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 LGALS2P05162 132 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 IQCF3P0C7M6 154 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 ICAM3P32942 547 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 UTP14CQ5TAP6 766 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 NLRX1Q86UT6 975 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 SESTD1Q86VW0 696 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 MYLIPQ8WY64 445 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 DHX38Q92620 1227 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 CTAGE1Q96RT6 745 aa16.99■□□□□ 0.31
UBE2D3-228ENST00000508974 CDX2Q99626 313 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms