RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 ITGB5P18084 799 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 EDNRBP24530 442 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 PRMT2P55345 433 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 ATP2C1P98194 919 aaPredicted RBP12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 LRCH2Q5VUJ6 765 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 OLFML2BQ68BL8 750 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 KCNV1Q6PIU1 500 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 FBXO16Q8IX29 292 aaPredicted RBP12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 USP6NLQ92738 828 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 FERMT2Q96AC1 680 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 FGD4Q96M96 766 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 KCNH7Q9NS40 1196 aa12.46□□□□□ -0.41
BRCC3P1-201ENST00000508559 ZNFX1Q9P2E3 1918 aaKnown RBP12.46□□□□□ -0.42
BRCC3P1-201ENST00000508559 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 ASTN1O14525 1302 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 IPO5O00410 1097 aaKnown RBP12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 TBX3O15119 743 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 MSH4O15457 936 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 ADCY3O60266 1144 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 PPP6R2O75170 966 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 PRPF40AO75400 957 aaKnown RBP12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 HSPA1AP0DMV8 641 aaKnown RBP12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 HSPA1BP0DMV9 641 aaKnown RBP12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 ARP10275 920 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 CYP2C19P33261 490 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 PRPHP41219 470 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 CTCFP49711 727 aaPredicted RBP12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 TTLL4Q14679 1199 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 CCL14Q16627 93 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 ARL6IP4Q66PJ3 421 aaKnown RBP12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 MAMDC4Q6UXC1 1216 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 GIMAP8Q8ND71 665 aaPredicted RBP12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 SCFD2Q8WU76 684 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 INPP4AQ96PE3 977 aaPredicted RBP12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 TMEM60Q9H2L4 133 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 ABHD16BQ9H3Z7 469 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
BRCC3P1-201ENST00000508559 IGLV3-22A0A075B6J6 115 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 SPATA31C2B4DYI2 1134 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 DDX39AO00148 427 aaKnown RBP12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 EDIL3O43854 480 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 CUTAO60888 179 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 TXNP10599 105 aaKnown RBP12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 TGFB3P10600 412 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 PTMSP20962 102 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 CNGA1P29973 690 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 TXLNAP40222 546 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 TECP42680 631 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 IRF5Q13568 498 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 ACVR2BQ13705 512 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 NEDD9Q14511 834 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 PTPAQ15257 358 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 CLEC17AQ6ZS10 378 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 OTOP1Q7RTM1 612 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 MORC4Q8TE76 937 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 TTC12Q9H892 705 aaPredicted RBP12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 AGO4Q9HCK5 861 aaKnown RBP12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 KCNMB3Q9NPA1 279 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 LRWD1Q9UFC0 647 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 SRPRBQ9Y5M8 271 aaKnown RBP12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 ZNF236Q9UL36 1845 aa12.44□□□□□ -0.42
BRCC3P1-201ENST00000508559 ELP1O95163 1332 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 FOXN1O15353 648 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 CHMP2AO43633 222 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 SORBS3O60504 671 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 SNAI1O95863 264 aaPredicted RBP12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 ELNP15502 786 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 ICAM3P32942 547 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 LONP1P36776 959 aaKnown RBP12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 SP4Q02446 784 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 ZRSR1Q15695 479 aaKnown RBP12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 PRAMEF19Q5SWL8 479 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 NCAPH2Q6IBW4 605 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 DHX37Q8IY37 1157 aaKnown RBP12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 SLAIN1Q8ND83 568 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 ERMNQ8TAM6 284 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 ETNPPLQ8TBG4 499 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 SLC5A5Q92911 643 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 GJA10Q969M2 543 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 LENG9Q96B70 501 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 CDK5RAP3Q96JB5 506 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 MTMR9Q96QG7 549 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 RIT2Q99578 217 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 MLXIPQ9HAP2 919 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 FAM13BQ9NYF5 915 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 FLRT1Q9NZU1 646 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 PCDHA7Q9UN72 937 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 SAMM50Q9Y512 469 aa12.43□□□□□ -0.42
BRCC3P1-201ENST00000508559 MGAMO43451 1857 aa12.42□□□□□ -0.42
BRCC3P1-201ENST00000508559 PLXNA1Q9UIW2 1896 aa12.42□□□□□ -0.42
BRCC3P1-201ENST00000508559 RGS20O76081 388 aa12.42□□□□□ -0.42
BRCC3P1-201ENST00000508559 HMGCRP04035 888 aa12.42□□□□□ -0.42
BRCC3P1-201ENST00000508559 HSPA8P11142 646 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms