RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 BCL6P41182 706 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 IQCEQ6IPM2 695 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 CEP68Q76N32 757 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 MILR1Q7Z6M3 343 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 NLRP10Q86W26 655 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 CCDC103Q8IW40 242 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 FAM178BQ8IXR5 827 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 DIO2Q92813 273 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 LRP2BPQ9P2M1 347 aa6.27□□□□□ -1.41
PDLIM5-211ENST00000508531 PRG4Q92954 1404 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 ARNTLO00327 626 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 MEFVO15553 781 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 EIF5BO60841 1220 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 SSBP05455 408 aaKnown RBP eCLIP6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 SLC6A11P48066 632 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 PRSS53Q2L4Q9 553 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 MROH9Q5TGP6 573 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 E4F1Q66K89 784 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 ZNF227Q86WZ6 799 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 FAM126BQ8IXS8 530 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 KYQ8NBH2 561 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 TRMT2BQ96GJ1 504 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 BORCS6Q96GS4 357 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 CAPN10Q9HC96 672 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 FBXL7Q9UJT9 491 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 FGD5Q6ZNL6 1462 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 DIP2BQ9P265 1576 aa6.26□□□□□ -1.41
PDLIM5-211ENST00000508531 SUSD5O60279 629 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 INSRRP14616 1297 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 RPL13P26373 211 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 HOXC12P31275 282 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 STAT5AP42229 794 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 KCNJ6P48051 423 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 ITGA1P56199 1179 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 SF1Q15637 639 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 ZNF827Q17R98 1081 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 RGL3Q3MIN7 710 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 ZC3H18Q86VM9 953 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 RIOX2Q8IUF8 465 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 KREMEN2Q8NCW0 462 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 PCDH18Q9HCL0 1135 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 CNOT11Q9UKZ1 510 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 X6R8D5 127 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 FANCIQ9NVI1 1328 aa6.25□□□□□ -1.41
PDLIM5-211ENST00000508531 MYO1BO43795 1136 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 DDAH1O94760 285 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 ITGB3P05106 788 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 GTF2A2P52657 109 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 KCNAB2Q13303 367 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 ZXDCQ2QGD7 858 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 TNNI3KQ59H18 835 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 MCTP2Q6DN12 878 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 Q8N1Y9 231 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 TTLL6Q8N841 843 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 RCBTB1Q8NDN9 531 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 TMEM169Q96HH4 297 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 GPR20Q99678 358 aa6.24□□□□□ -1.41
PDLIM5-211ENST00000508531 SCG5P05408 212 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 LCP1P13796 627 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 ERCC5P28715 1186 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 ETFBP38117 255 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 MAGEA10P43363 369 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 CR1LQ2VPA4 569 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 MRM1Q6IN84 353 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 VPS37DQ86XT2 251 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 PPIL6Q8IXY8 311 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 MICAL1Q8TDZ2 1067 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 CHAMP1Q96JM3 812 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 YTHDC1Q96MU7 727 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 YIPF4Q9BSR8 244 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 COA3Q9Y2R0 106 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 PCDHA2Q9Y5H9 948 aa6.23□□□□□ -1.41
PDLIM5-211ENST00000508531 DDX3XO00571 662 aaKnown RBP eCLIP6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 CPP00450 1065 aa6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 GFRA1P56159 465 aa6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 PUM1Q14671 1186 aaKnown RBP eCLIP6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 FAM26FQ5R3K3 315 aa6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 PRR31Q5SQ13 230 aa6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 ACBD5Q5T8D3 534 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 TXNDC5Q8NBS9 432 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 RBM15Q96T37 977 aaKnown RBP eCLIP6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 PRKAG3Q9UGI9 489 aa6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 GRIN2AQ12879 1464 aa6.22□□□□□ -1.41
PDLIM5-211ENST00000508531 LOC105371045A0A1W2PR82 267 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 MROH6A6NGR9 719 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 LTBRP36941 435 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 HSPA2P54652 639 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 NKX3-2P78367 333 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 KIAA2012Q0VF49 1180 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 ADAM9Q13443 819 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 LSAMPQ13449 338 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 FXNQ16595 210 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 GLIPR1L2Q4G1C9 344 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 TBC1D10BQ4KMP7 808 aaPredicted RBP6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 DENND5AQ6IQ26 1287 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 TMEM145Q8NBT3 493 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 ARRDC4Q8NCT1 418 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 ZSWIM3Q96MP5 696 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 SMPD4Q9NXE4 827 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 INVSQ9Y283 1065 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms