RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 CNGA1P29973 690 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 RGS2P41220 211 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 NLRX1Q86UT6 975 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.42
PROM1-207ENST00000508167 ERO1AQ96HE7 468 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 SAMM50Q9Y512 469 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 DDX39AO00148 427 aaKnown RBP12.4□□□□□ -0.42
PROM1-207ENST00000508167 NEMFO60524 1076 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 PTPREP23469 700 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 C17orf53Q8N3J3 647 aaPredicted RBP12.4□□□□□ -0.42
PROM1-207ENST00000508167 CTAGE5O15320 804 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 FOXN1O15353 648 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 TXKP42681 527 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 SARSP49591 514 aaKnown RBP12.4□□□□□ -0.42
PROM1-207ENST00000508167 LACTBP83111 547 aaPredicted RBP12.4□□□□□ -0.42
PROM1-207ENST00000508167 TMEM266Q2M3C6 531 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 KIAA1524Q8TCG1 905 aa12.4□□□□□ -0.42
PROM1-207ENST00000508167 TRIM44Q96DX7 344 aaPredicted RBP12.4□□□□□ -0.42
PROM1-207ENST00000508167 TDP2O95551 362 aa12.4□□□□□ -0.43
PROM1-207ENST00000508167 CALCRLQ16602 461 aa12.4□□□□□ -0.43
PROM1-207ENST00000508167 TRMT1LQ7Z2T5 733 aaKnown RBP12.4□□□□□ -0.43
PROM1-207ENST00000508167 C4orf32Q8N8J7 132 aa12.4□□□□□ -0.43
PROM1-207ENST00000508167 COL20A1Q9P218 1284 aa12.4□□□□□ -0.43
PROM1-207ENST00000508167 TRIM17Q9Y577 477 aa12.4□□□□□ -0.43
PROM1-207ENST00000508167 ASB14A6NK59 587 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 BMP15O95972 392 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 TRAPPC10P48553 1259 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 ZNF165P49910 485 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 LONRF3Q496Y0 759 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 USP49Q70CQ1 688 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 SAMD3Q8N6K7 520 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 PXMP2Q9NR77 195 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 SLC15A5A6NIM6 579 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 OPLAHO14841 1288 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 ACTN4O43707 911 aaKnown RBP12.39□□□□□ -0.43
PROM1-207ENST00000508167 HSD17B4P51659 736 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 STX1AQ16623 288 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 PDCD2LQ9BRP1 358 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 ARHGAP39Q9C0H5 1083 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 PHIPQ8WWQ0 1821 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.39□□□□□ -0.43
PROM1-207ENST00000508167 FLT3LGP49771 235 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 PTGDRQ13258 359 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 POTEEQ6S8J3 1075 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 SOCS4Q8WXH5 440 aa12.39□□□□□ -0.43
PROM1-207ENST00000508167 CHMP2AO43633 222 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 EDIL3O43854 480 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 MAP2K5Q13163 448 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 RAB34Q9BZG1 259 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 VWA3AA6NCI4 1184 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 GCFC2P16383 781 aaKnown RBP12.38□□□□□ -0.43
PROM1-207ENST00000508167 ALDH5A1P51649 535 aaPredicted RBP12.38□□□□□ -0.43
PROM1-207ENST00000508167 USP11P51784 963 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 MTMR1Q13613 665 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 DTHD1Q6ZMT9 781 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 ZNF296Q8WUU4 475 aaPredicted RBP12.38□□□□□ -0.43
PROM1-207ENST00000508167 SREBF1P36956 1147 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 PGM5Q15124 567 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 CEP55Q53EZ4 464 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 SH3RF1Q7Z6J0 888 aa12.38□□□□□ -0.43
PROM1-207ENST00000508167 CDK5RAP3Q96JB5 506 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 ZNF577Q9BSK1 485 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 GAS7O60861 476 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 TXLNAP40222 546 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 MFSD14CQ5VZR4 134 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.37□□□□□ -0.43
PROM1-207ENST00000508167 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
PROM1-207ENST00000508167 CUTAO60888 179 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 COBLO75128 1261 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 CAVIN2O95810 425 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 IL31RAQ8NI17 732 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 MLXIPQ9HAP2 919 aa12.37□□□□□ -0.43
PROM1-207ENST00000508167 OR52Z1P0C646 297 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 PRKCZQ05513 592 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 CYP2W1Q8TAV3 490 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 LRRC15Q8TF66 581 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 TRIM47Q96LD4 638 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 IWS1Q96ST2 819 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 SDF4Q9BRK5 362 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 PCDHA12Q9UN75 941 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 SRPRBQ9Y5M8 271 aaKnown RBP12.36□□□□□ -0.43
PROM1-207ENST00000508167 CYP2C19P33261 490 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 ARID5BQ14865 1188 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 ARMCX2Q7L311 632 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 POTEDQ86YR6 584 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 FBXO16Q8IX29 292 aaPredicted RBP12.36□□□□□ -0.43
PROM1-207ENST00000508167 ABRAQ8N0Z2 381 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 MRFAP1L1Q96HT8 127 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
PROM1-207ENST00000508167 INTS13Q9NVM9 706 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 SOWAHBA6NEL2 793 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 EIF3JO75822 258 aaKnown RBP12.36□□□□□ -0.43
PROM1-207ENST00000508167 PTGS1P23219 599 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 TECP42680 631 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 FAM133AQ8N9E0 248 aa12.36□□□□□ -0.43
PROM1-207ENST00000508167 CDHR1Q96JP9 859 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms