RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 TRIP12Q14669 1992 aaPredicted RBP18.34■□□□□ 0.53
SSBP2-207ENST00000507472 HOXD8P13378 290 aaPredicted RBP18.34■□□□□ 0.53
SSBP2-207ENST00000507472 SELPP16109 830 aa18.34■□□□□ 0.53
SSBP2-207ENST00000507472 GPNMBQ14956 572 aa18.34■□□□□ 0.53
SSBP2-207ENST00000507472 CCDC85BQ15834 202 aaPredicted RBP18.34■□□□□ 0.53
SSBP2-207ENST00000507472 ZNF654Q8IZM8 581 aa18.34■□□□□ 0.53
SSBP2-207ENST00000507472 PHOSPHO2Q8TCD6 241 aa18.34■□□□□ 0.53
SSBP2-207ENST00000507472 KATNAL1Q9BW62 490 aa18.34■□□□□ 0.53
SSBP2-207ENST00000507472 BCAS3Q9H6U6 928 aa18.34■□□□□ 0.53
SSBP2-207ENST00000507472 SPTBN5Q9NRC6 3674 aaKnown RBP18.34■□□□□ 0.53
SSBP2-207ENST00000507472 PRC1O43663 620 aa18.33■□□□□ 0.52
SSBP2-207ENST00000507472 CA3P07451 260 aa18.33■□□□□ 0.52
SSBP2-207ENST00000507472 CKBP12277 381 aa18.33■□□□□ 0.52
SSBP2-207ENST00000507472 UBA1P22314 1058 aaKnown RBP18.33■□□□□ 0.52
SSBP2-207ENST00000507472 ZNF200P98182 395 aaPredicted RBP18.33■□□□□ 0.52
SSBP2-207ENST00000507472 COL9A3Q14050 684 aaPredicted RBP18.33■□□□□ 0.52
SSBP2-207ENST00000507472 LRRC8DQ7L1W4 858 aa18.33■□□□□ 0.52
SSBP2-207ENST00000507472 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.52
SSBP2-207ENST00000507472 SLC9A7Q96T83 725 aa18.33■□□□□ 0.52
SSBP2-207ENST00000507472 MAP3K14Q99558 947 aa18.33■□□□□ 0.52
SSBP2-207ENST00000507472 LSG1Q9H089 658 aaKnown RBP18.33■□□□□ 0.52
SSBP2-207ENST00000507472 MLXIPQ9HAP2 919 aa18.33■□□□□ 0.52
SSBP2-207ENST00000507472 DDAH1O94760 285 aa18.32■□□□□ 0.52
SSBP2-207ENST00000507472 KIF5BP33176 963 aa18.32■□□□□ 0.52
SSBP2-207ENST00000507472 MRPS9P82933 396 aaKnown RBP18.32■□□□□ 0.52
SSBP2-207ENST00000507472 RBL2Q08999 1139 aa18.32■□□□□ 0.52
SSBP2-207ENST00000507472 CASC1Q6TDU7 716 aa18.32■□□□□ 0.52
SSBP2-207ENST00000507472 HERC6Q8IVU3 1022 aa18.32■□□□□ 0.52
SSBP2-207ENST00000507472 RRP36Q96EU6 259 aaKnown RBP18.32■□□□□ 0.52
SSBP2-207ENST00000507472 SPZ1Q9BXG8 430 aa18.32■□□□□ 0.52
SSBP2-207ENST00000507472 RTEL1Q9NZ71 1219 aa18.32■□□□□ 0.52
SSBP2-207ENST00000507472 MYH7BA7E2Y1 1941 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 TRANK1O15050 2925 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 SLC27A2O14975 620 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 BAIAP3O94812 1187 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 SMARCA1P28370 1054 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 MCM5P33992 734 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 PTK7Q13308 1070 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 HIC1Q14526 733 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 NFXL1Q6ZNB6 911 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 TMTC2Q8N394 836 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 WNT8BQ93098 351 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 C16orf70Q9BSU1 422 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 MTA3Q9BTC8 594 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 NCOR1O75376 2440 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 GBF1Q92538 1859 aa18.31■□□□□ 0.52
SSBP2-207ENST00000507472 FRMPD4Q14CM0 1322 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 SPATA31C2B4DYI2 1134 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 KIF28PB7ZC32 967 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 RFXAPO00287 272 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 SH2B2O14492 632 aaPredicted RBP18.3■□□□□ 0.52
SSBP2-207ENST00000507472 NBNO60934 754 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 ICAM3P32942 547 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 TRIM71Q2Q1W2 868 aaKnown RBP18.3■□□□□ 0.52
SSBP2-207ENST00000507472 GNPTABQ3T906 1256 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 USP17L6PQ6QN14 398 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 CMTR1Q8N1G2 835 aaKnown RBP18.3■□□□□ 0.52
SSBP2-207ENST00000507472 SRBD1Q8N5C6 995 aaKnown RBP18.3■□□□□ 0.52
SSBP2-207ENST00000507472 SYMPKQ92797 1274 aaKnown RBP18.3■□□□□ 0.52
SSBP2-207ENST00000507472 TMEM87BQ96K49 555 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
SSBP2-207ENST00000507472 LZTS2Q9BRK4 669 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 CERS4Q9HA82 394 aa18.3■□□□□ 0.52
SSBP2-207ENST00000507472 PRRC2BQ5JSZ5 2229 aaKnown RBP18.29■□□□□ 0.52
SSBP2-207ENST00000507472 CCDC69A6NI79 296 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 MEIS2O14770 477 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 STAM2O75886 525 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 PARNO95453 639 aaKnown RBP18.29■□□□□ 0.52
SSBP2-207ENST00000507472 CXCL10P02778 98 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 RXRAP19793 462 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 GNAQP50148 359 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 SEMA3FQ13275 785 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 NECTIN1Q15223 517 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 TJAP1Q5JTD0 557 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 ZNF618Q5T7W0 954 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 TRAF7Q6Q0C0 670 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 SMARCC2Q8TAQ2 1214 aa18.29■□□□□ 0.52
SSBP2-207ENST00000507472 SEC63Q9UGP8 760 aaKnown RBP18.29■□□□□ 0.52
SSBP2-207ENST00000507472 H3BRB1 525 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 NOP56O00567 594 aaKnown RBP18.28■□□□□ 0.52
SSBP2-207ENST00000507472 ARHGEF15O94989 841 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 LGALS2P05162 132 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 LIFRP42702 1097 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 KCNJ6P48051 423 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 WDR5P61964 334 aaKnown RBP18.28■□□□□ 0.52
SSBP2-207ENST00000507472 TAP1Q03518 808 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 NEDD9Q14511 834 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 TCTN1Q2MV58 587 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 CNKSR3Q6P9H4 555 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 METTL7BQ6UX53 244 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 CYFIP1Q7L576 1253 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 TMCO2Q7Z6W1 182 aaPredicted RBP18.28■□□□□ 0.52
SSBP2-207ENST00000507472 SERINC5Q86VE9 423 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 RAB11FIP4Q86YS3 637 aa18.28■□□□□ 0.52
SSBP2-207ENST00000507472 ATXN2LQ8WWM7 1075 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms