RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 KIF3AQ9Y496 699 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 KIAA0100Q14667 2235 aaKnown RBP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 PLXNA1Q9UIW2 1896 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 FOSP01100 380 aaPredicted RBP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ZNF865P0CJ78 1059 aaPredicted RBP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ARP10275 920 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 CCND2P30279 289 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ZNF76P36508 570 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 SREBF1P36956 1147 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 TOB1P50616 345 aaPredicted RBP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 SEMA3FQ13275 785 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 AP3B2Q13367 1082 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ACVR2BQ13705 512 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 NONOQ15233 471 aaKnown RBP eCLIP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ZNF174Q15697 407 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 SLC9C1Q4G0N8 1177 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 MFSD14CQ5VZR4 134 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 OLFML2BQ68BL8 750 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 GALNT17Q6IS24 598 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 TAPT1Q6NXT6 567 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 FBXO46Q6PJ61 603 aaPredicted RBP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 MAMDC4Q6UXC1 1216 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 CRYGNQ8WXF5 182 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 FTOQ9C0B1 505 aaKnown RBP eCLIP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 GLT8D2Q9H1C3 349 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 UNC93B1Q9H1C4 597 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 BRMS1Q9HCU9 246 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 MAP3K20Q9NYL2 800 aaKnown RBP10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 MRVI1Q9Y6F6 885 aa10.07□□□□□ -0.8
SCAMP1-202ENST00000506858 ASB14A6NK59 587 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 SLC37A4O43826 429 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 ATP9AO75110 1047 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 HMGCRP04035 888 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 SP2Q02086 613 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 RESTQ13127 1097 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 STXBP2Q15833 593 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 LY6KQ17RY6 165 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 CCDC144BQ3MJ40 725 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 PRR16Q569H4 304 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 NOSTRINQ8IVI9 506 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 MORC4Q8TE76 937 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 IWS1Q96ST2 819 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 FOXP1Q9H334 677 aaPredicted RBP10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 FRMPD4Q14CM0 1322 aa10.06□□□□□ -0.8
SCAMP1-202ENST00000506858 EIF3JO75822 258 aaKnown RBP10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 PDCP20941 246 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 PRMT2P55345 433 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 PCNX4Q63HM2 1172 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 SAMD3Q8N6K7 520 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 PXYLP1Q8TE99 480 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 IPO9Q96P70 1041 aaKnown RBP10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 MXRA8Q9BRK3 442 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 CNPY2Q9Y2B0 182 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 PCDHB6Q9Y5E3 794 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 UBIAD1Q9Y5Z9 338 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 MYH7BA7E2Y1 1941 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 DNAH12Q6ZR08 3092 aa10.05□□□□□ -0.8
SCAMP1-202ENST00000506858 RBBP6Q7Z6E9 1792 aaKnown RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 IGLV3-22A0A075B6J6 115 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 DDX39AO00148 427 aaKnown RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 ZSCAN22P10073 491 aaPredicted RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 CYBAP13498 195 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 SMPD1P17405 629 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 MCM7P33993 719 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 DDIT3P35638 169 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 SP4Q02446 784 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 CEBPZQ03701 1054 aaKnown RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 MAP3K21Q5TCX8 1036 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 NEK8Q86SG6 692 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 PLA2G4DQ86XP0 818 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 TMEM60Q9H2L4 133 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 ABHD16BQ9H3Z7 469 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 JADE2Q9NQC1 790 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 TFIP11Q9UBB9 837 aaKnown RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 ZNF236Q9UL36 1845 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 SYNGAP1Q96PV0 1343 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 MEIS1O00470 390 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 DYNC1LI2O43237 492 aaPredicted RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 PGK1P00558 417 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 CYP3A4P08684 503 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 CCL5P13501 91 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 CEP55Q53EZ4 464 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 CCDC62Q6P9F0 684 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 SPNS2Q8IVW8 549 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 FAM177A1Q8N128 213 aaPredicted RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 PPP1R13LQ8WUF5 828 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 LENG9Q96B70 501 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 INPP4AQ96PE3 977 aaPredicted RBP10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 EHMT1Q9H9B1 1298 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 KCNH7Q9NS40 1196 aa10.04□□□□□ -0.8
SCAMP1-202ENST00000506858 MKI67P46013 3256 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 MYADML2A6NDP7 307 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 SPATA31C2B4DYI2 1134 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 RBAK-RBAKDNI3L0D1 243 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 MSH4O15457 936 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 BRD1O95696 1058 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 F13A1P00488 732 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms