RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 Q9Y3F1 56 aa14.62□□□□□ -0.07
TCOF1-210ENST00000506767 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
TCOF1-210ENST00000506767 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 NKRFO15226 690 aaKnown RBP eCLIP14.61□□□□□ -0.07
TCOF1-210ENST00000506767 DUSP11O75319 330 aaKnown RBP14.61□□□□□ -0.07
TCOF1-210ENST00000506767 MYCP01106 439 aaPredicted RBP14.61□□□□□ -0.07
TCOF1-210ENST00000506767 GJB1P08034 283 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 TXNP10599 105 aaKnown RBP14.61□□□□□ -0.07
TCOF1-210ENST00000506767 ZNF76P36508 570 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 ANP32AP39687 249 aaKnown RBP14.61□□□□□ -0.07
TCOF1-210ENST00000506767 NKX3-2P78367 333 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 SP2Q02086 613 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 LY6KQ17RY6 165 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 Q4G0T1 1027 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 PPP4R3AQ6IN85 833 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 CDHR1Q96JP9 859 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 SENP7Q9BQF6 1050 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 MRVI1Q9Y6F6 885 aa14.61□□□□□ -0.07
TCOF1-210ENST00000506767 VPS37CA5D8V6 355 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-210ENST00000506767 WNT7AO00755 349 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 SGPL1O95470 568 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 TDP2O95551 362 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 ARP10275 920 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 RARBP10826 455 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 MTMR1Q13613 665 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 GNL2Q13823 731 aaKnown RBP14.6□□□□□ -0.07
TCOF1-210ENST00000506767 LETM2Q2VYF4 491 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 MCTP1Q6DN14 999 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 PLA2G4DQ86XP0 818 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 LENG1Q96BZ8 264 aaPredicted RBP14.6□□□□□ -0.07
TCOF1-210ENST00000506767 DEFB118Q96PH6 123 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 NAP1L4Q99733 375 aaKnown RBP14.6□□□□□ -0.07
TCOF1-210ENST00000506767 CRISPLD2Q9H0B8 497 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 UPF3AQ9H1J1 476 aaKnown RBP14.6□□□□□ -0.07
TCOF1-210ENST00000506767 KCNH7Q9NS40 1196 aa14.6□□□□□ -0.07
TCOF1-210ENST00000506767 ATP9AO75110 1047 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 ADAMTS4O75173 837 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 GCFC2P16383 781 aaKnown RBP14.59□□□□□ -0.07
TCOF1-210ENST00000506767 KCNA2P16389 499 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 CAPN2P17655 700 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 UBA1P22314 1058 aaKnown RBP14.59□□□□□ -0.07
TCOF1-210ENST00000506767 PTGS1P23219 599 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 GJA8P48165 433 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 TRAPPC10P48553 1259 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 TOB1P50616 345 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-210ENST00000506767 GJA9P57773 515 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 SETQ01105 290 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-210ENST00000506767 PRR16Q569H4 304 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 GJC2Q5T442 439 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-210ENST00000506767 ANO1Q5XXA6 986 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 U2AF1L4Q8WU68 220 aaKnown RBP14.59□□□□□ -0.07
TCOF1-210ENST00000506767 COPS5Q92905 334 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 EMID1Q96A84 441 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-210ENST00000506767 AGO4Q9HCK5 861 aaKnown RBP14.59□□□□□ -0.07
TCOF1-210ENST00000506767 OGDHLQ9ULD0 1010 aa14.59□□□□□ -0.07
TCOF1-210ENST00000506767 CENPFP49454 3210 aa14.58□□□□□ -0.07
TCOF1-210ENST00000506767 CTAGE5O15320 804 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 SLC37A4O43826 429 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 CCNT1O60563 726 aaKnown RBP14.58□□□□□ -0.08
TCOF1-210ENST00000506767 DDIT3P35638 169 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 ARHGAP1Q07960 439 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 RESTQ13127 1097 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 NEDD9Q14511 834 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 CELF3Q5SZQ8 465 aaKnown RBP14.58□□□□□ -0.08
TCOF1-210ENST00000506767 MYSM1Q5VVJ2 828 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 BRAPQ7Z569 592 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 TLK2Q86UE8 772 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 KLHDC9Q8NEP7 349 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 TMEM106CQ9BVX2 250 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 BCAS3Q9H6U6 928 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 XPNPEP3Q9NQH7 507 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 DDX25Q9UHL0 483 aaKnown RBP14.58□□□□□ -0.08
TCOF1-210ENST00000506767 NFASCO94856 1347 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 SYNRGQ9UMZ2 1314 aa14.58□□□□□ -0.08
TCOF1-210ENST00000506767 DOCK5Q9H7D0 1870 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 MSH4O15457 936 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 DHX15O43143 795 aaKnown RBP14.57□□□□□ -0.08
TCOF1-210ENST00000506767 DYNC1LI2O43237 492 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-210ENST00000506767 GGPS1O95749 300 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 GH1P01241 217 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 CST5P28325 142 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-210ENST00000506767 ITGB3BPQ13352 177 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-210ENST00000506767 ORC2Q13416 577 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-210ENST00000506767 LAMC2Q13753 1193 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 PKP1Q13835 747 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 RILPL1Q5EBL4 403 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 FERMT3Q86UX7 667 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 GIMAP8Q8ND71 665 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-210ENST00000506767 ZSCAN16Q9H4T2 348 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-210ENST00000506767 KCNMB3Q9NPA1 279 aa14.57□□□□□ -0.08
TCOF1-210ENST00000506767 NOL7Q9UMY1 257 aaKnown RBP14.57□□□□□ -0.08
TCOF1-210ENST00000506767 MYADML2A6NDP7 307 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 A6NJR5 290 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 IPO5O00410 1097 aaKnown RBP14.56□□□□□ -0.08
TCOF1-210ENST00000506767 TBX3O15119 743 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 FARP2O94887 1054 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-210ENST00000506767 PGK1P00558 417 aa14.56□□□□□ -0.08
TCOF1-210ENST00000506767 ZSCAN22P10073 491 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-210ENST00000506767 IRX5P78411 483 aaPredicted RBP14.56□□□□□ -0.08
TCOF1-210ENST00000506767 LRRC41Q15345 812 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms