RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TTC28Q96AY4 2481 aa28.57■■■□□ 2.16
HERC4-212ENST00000505760 PPFIA4O75335 1185 aa28.56■■■□□ 2.16
HERC4-212ENST00000505760 BAIAP3O94812 1187 aa28.56■■■□□ 2.16
HERC4-212ENST00000505760 CA3P07451 260 aa28.56■■■□□ 2.16
HERC4-212ENST00000505760 TGFB3P10600 412 aa28.56■■■□□ 2.16
HERC4-212ENST00000505760 LRRC8DQ7L1W4 858 aa28.56■■■□□ 2.16
HERC4-212ENST00000505760 MB21D2Q8IYB1 491 aaPredicted RBP28.56■■■□□ 2.16
HERC4-212ENST00000505760 HSDL1Q3SXM5 330 aa28.55■■■□□ 2.16
HERC4-212ENST00000505760 TJAP1Q5JTD0 557 aa28.55■■■□□ 2.16
HERC4-212ENST00000505760 CASC1Q6TDU7 716 aa28.55■■■□□ 2.16
HERC4-212ENST00000505760 DHX38Q92620 1227 aaKnown RBP28.55■■■□□ 2.16
HERC4-212ENST00000505760 ZFP91Q96JP5 570 aaPredicted RBP28.55■■■□□ 2.16
HERC4-212ENST00000505760 MLXIPQ9HAP2 919 aa28.55■■■□□ 2.16
HERC4-212ENST00000505760 KIF28PB7ZC32 967 aa28.54■■■□□ 2.16
HERC4-212ENST00000505760 HAS3O00219 553 aa28.54■■■□□ 2.16
HERC4-212ENST00000505760 PARNO95453 639 aaKnown RBP28.54■■■□□ 2.16
HERC4-212ENST00000505760 HOXD8P13378 290 aaPredicted RBP28.54■■■□□ 2.16
HERC4-212ENST00000505760 UBA1P22314 1058 aaKnown RBP28.54■■■□□ 2.16
HERC4-212ENST00000505760 KCNJ6P48051 423 aa28.54■■■□□ 2.16
HERC4-212ENST00000505760 HERC6Q8IVU3 1022 aa28.54■■■□□ 2.16
HERC4-212ENST00000505760 CTCFLQ8NI51 663 aaPredicted RBP28.54■■■□□ 2.16
HERC4-212ENST00000505760 REV3LO60673 3130 aa28.54■■■□□ 2.16
HERC4-212ENST00000505760 CKBP12277 381 aa28.53■■■□□ 2.16
HERC4-212ENST00000505760 KIF5BP33176 963 aa28.53■■■□□ 2.16
HERC4-212ENST00000505760 SP2Q02086 613 aa28.53■■■□□ 2.16
HERC4-212ENST00000505760 RBL2Q08999 1139 aa28.53■■■□□ 2.16
HERC4-212ENST00000505760 ZNF654Q8IZM8 581 aa28.53■■■□□ 2.16
HERC4-212ENST00000505760 MAP3K14Q99558 947 aa28.53■■■□□ 2.16
HERC4-212ENST00000505760 LY9Q9HBG7 655 aa28.53■■■□□ 2.16
HERC4-212ENST00000505760 THEGQ9P2T0 379 aa28.53■■■□□ 2.16
HERC4-212ENST00000505760 DDAH1O94760 285 aa28.52■■■□□ 2.16
HERC4-212ENST00000505760 PTK7Q13308 1070 aa28.52■■■□□ 2.16
HERC4-212ENST00000505760 GNPTABQ3T906 1256 aa28.52■■■□□ 2.16
HERC4-212ENST00000505760 GPKOWQ92917 476 aaPredicted RBP eCLIP28.52■■■□□ 2.16
HERC4-212ENST00000505760 RRP36Q96EU6 259 aaKnown RBP28.52■■■□□ 2.16
HERC4-212ENST00000505760 MYL10Q9BUA6 226 aa28.52■■■□□ 2.16
HERC4-212ENST00000505760 SPZ1Q9BXG8 430 aa28.52■■■□□ 2.16
HERC4-212ENST00000505760 PRC1O43663 620 aa28.51■■■□□ 2.15
HERC4-212ENST00000505760 NFXL1Q6ZNB6 911 aa28.51■■■□□ 2.15
HERC4-212ENST00000505760 MICALL1Q8N3F8 863 aa28.51■■■□□ 2.15
HERC4-212ENST00000505760 ATXN2LQ8WWM7 1075 aaKnown RBP28.51■■■□□ 2.15
HERC4-212ENST00000505760 SEC63Q9UGP8 760 aaKnown RBP28.51■■■□□ 2.15
HERC4-212ENST00000505760 STAM2O75886 525 aa28.5■■■□□ 2.15
HERC4-212ENST00000505760 MCM5P33992 734 aa28.5■■■□□ 2.15
HERC4-212ENST00000505760 GPNMBQ14956 572 aa28.5■■■□□ 2.15
HERC4-212ENST00000505760 CNKSR3Q6P9H4 555 aa28.5■■■□□ 2.15
HERC4-212ENST00000505760 CUL5Q93034 780 aa28.5■■■□□ 2.15
HERC4-212ENST00000505760 MTA3Q9BTC8 594 aa28.5■■■□□ 2.15
HERC4-212ENST00000505760 CERS4Q9HA82 394 aa28.5■■■□□ 2.15
HERC4-212ENST00000505760 PTPRSQ13332 1948 aa28.49■■■□□ 2.15
HERC4-212ENST00000505760 NOP56O00567 594 aaKnown RBP28.49■■■□□ 2.15
HERC4-212ENST00000505760 TLL1O43897 1013 aa28.49■■■□□ 2.15
HERC4-212ENST00000505760 WDR5P61964 334 aaKnown RBP28.49■■■□□ 2.15
HERC4-212ENST00000505760 ZNF200P98182 395 aaPredicted RBP28.49■■■□□ 2.15
HERC4-212ENST00000505760 SMARCC2Q8TAQ2 1214 aa28.49■■■□□ 2.15
HERC4-212ENST00000505760 LZTS2Q9BRK4 669 aa28.49■■■□□ 2.15
HERC4-212ENST00000505760 C16orf70Q9BSU1 422 aa28.49■■■□□ 2.15
HERC4-212ENST00000505760 TSPYL2Q9H2G4 693 aaPredicted RBP28.49■■■□□ 2.15
HERC4-212ENST00000505760 FRMPD4Q14CM0 1322 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 CCDC69A6NI79 296 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 NBNO60934 754 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 CXCL10P02778 98 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 GNAQP50148 359 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 MRPS9P82933 396 aaKnown RBP28.48■■■□□ 2.15
HERC4-212ENST00000505760 TMTC2Q8N394 836 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 INPP4AQ96PE3 977 aaPredicted RBP28.48■■■□□ 2.15
HERC4-212ENST00000505760 ZBED2Q9BTP6 218 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 LSG1Q9H089 658 aaKnown RBP28.48■■■□□ 2.15
HERC4-212ENST00000505760 RTEL1Q9NZ71 1219 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 DOCK5Q9H7D0 1870 aa28.48■■■□□ 2.15
HERC4-212ENST00000505760 H3BRB1 525 aa28.47■■■□□ 2.15
HERC4-212ENST00000505760 GTPBP6O43824 516 aaPredicted RBP28.47■■■□□ 2.15
HERC4-212ENST00000505760 SMARCA1P28370 1054 aa28.47■■■□□ 2.15
HERC4-212ENST00000505760 TAP1Q03518 808 aa28.47■■■□□ 2.15
HERC4-212ENST00000505760 NEDD9Q14511 834 aa28.47■■■□□ 2.15
HERC4-212ENST00000505760 ZNF618Q5T7W0 954 aa28.47■■■□□ 2.15
HERC4-212ENST00000505760 ARNTL2Q8WYA1 636 aa28.47■■■□□ 2.15
HERC4-212ENST00000505760 TMEM87BQ96K49 555 aa28.47■■■□□ 2.15
HERC4-212ENST00000505760 TUT1Q9H6E5 874 aaKnown RBP28.47■■■□□ 2.15
HERC4-212ENST00000505760 RFXAPO00287 272 aa28.46■■■□□ 2.15
HERC4-212ENST00000505760 ICAM3P32942 547 aa28.46■■■□□ 2.15
HERC4-212ENST00000505760 MRPS5P82675 430 aaKnown RBP28.46■■■□□ 2.15
HERC4-212ENST00000505760 TRIM71Q2Q1W2 868 aaKnown RBP28.46■■■□□ 2.15
HERC4-212ENST00000505760 USP17L6PQ6QN14 398 aa28.46■■■□□ 2.15
HERC4-212ENST00000505760 WNT8BQ93098 351 aa28.46■■■□□ 2.15
HERC4-212ENST00000505760 ASB2Q96Q27 587 aa28.46■■■□□ 2.15
HERC4-212ENST00000505760 ESYT1Q9BSJ8 1104 aa28.46■■■□□ 2.15
HERC4-212ENST00000505760 BCAS3Q9H6U6 928 aa28.46■■■□□ 2.15
HERC4-212ENST00000505760 PRRC2BQ5JSZ5 2229 aaKnown RBP28.46■■■□□ 2.15
HERC4-212ENST00000505760 MUC3AQ02505 3323 aa28.46■■■□□ 2.15
HERC4-212ENST00000505760 ABHD14A-ACY1A0A1B0GW23 586 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 C17orf102A2RUQ5 167 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 SPATA31C2B4DYI2 1134 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 SH2B2O14492 632 aaPredicted RBP28.45■■■□□ 2.14
HERC4-212ENST00000505760 SLC27A2O14975 620 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 FIBPO43427 364 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 LGALS2P05162 132 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 IKBKEQ14164 716 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 HIC1Q14526 733 aa28.45■■■□□ 2.14
HERC4-212ENST00000505760 METTL7BQ6UX53 244 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms