RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 CUL5Q93034 780 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 ALG1Q9BT22 464 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 SPZ1Q9BXG8 430 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 TM6SF1Q9BZW5 370 aa14.32□□□□□ -0.12
PDGFRA-204ENST00000504461 SORBS3O60504 671 aa14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 GGPS1O95749 300 aa14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 IQCF3P0C7M6 154 aa14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 PSEN2P49810 448 aa14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 FBXL16Q8N461 479 aa14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 SMARCC2Q8TAQ2 1214 aa14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 ZFP91Q96JP5 570 aaPredicted RBP14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 FTOQ9C0B1 505 aaKnown RBP eCLIP14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 MLXIPQ9HAP2 919 aa14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 SLC28A3Q9HAS3 691 aa14.31□□□□□ -0.12
PDGFRA-204ENST00000504461 SH2B2O14492 632 aaPredicted RBP14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 PPFIA4O75335 1185 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 RGS20O76081 388 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 LIFRP42702 1097 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 MFSD10Q14728 455 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 GNPTABQ3T906 1256 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 CELF3Q5SZQ8 465 aaKnown RBP14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 GDF6Q6KF10 455 aaPredicted RBP14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 SYNE3Q6ZMZ3 975 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 SESTD1Q86VW0 696 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 RASEFQ8IZ41 740 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 IL31RAQ8NI17 732 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 CAGE1Q8TC20 777 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 KAT2BQ92831 832 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 IL17RAQ96F46 866 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 SPATA33Q96N06 139 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 GAS2L1Q99501 681 aaPredicted RBP14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 HDAC6Q9UBN7 1215 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 SNX14Q9Y5W7 946 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 SLC12A7Q9Y666 1083 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 MYO9BQ13459 2157 aa14.3□□□□□ -0.12
PDGFRA-204ENST00000504461 TET1Q8NFU7 2136 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 STAM2O75886 525 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 ZNF286BP0CG31 522 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 ATP2A2P16615 1042 aaKnown RBP14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 RXRAP19793 462 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 EXOSC10Q01780 885 aaKnown RBP14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 SP2Q02086 613 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 KIAA0753Q2KHM9 967 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 HSDL1Q3SXM5 330 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 SRBD1Q8N5C6 995 aaKnown RBP14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 LRRC2Q9BYS8 371 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 NKX2-4Q9H2Z4 354 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 RTEL1Q9NZ71 1219 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 GTF2IRD1Q9UHL9 959 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 CYP46A1Q9Y6A2 500 aa14.29□□□□□ -0.12
PDGFRA-204ENST00000504461 PLEKHA8P1O95397 391 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 F2P00734 622 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 RABGGTBP53611 331 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 FGD1P98174 961 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 PTPRSQ13332 1948 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 USP17L6PQ6QN14 398 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 CCDC82Q8N4S0 544 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 AFAP1L1Q8TED9 768 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 JAKMIP1Q96N16 626 aaKnown RBP14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 PRDM12Q9H4Q4 367 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 ZSWIM6Q9HCJ5 1215 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 PCDHA11Q9Y5I1 949 aa14.28□□□□□ -0.12
PDGFRA-204ENST00000504461 HAS3O00219 553 aa14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 NOP56O00567 594 aaKnown RBP14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 PARNO95453 639 aaKnown RBP14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 SELPP16109 830 aa14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 MRPS9P82933 396 aaKnown RBP14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 NEDD9Q14511 834 aa14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 RUFY3Q7L099 469 aa14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 RAB11FIP4Q86YS3 637 aa14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 GPKOWQ92917 476 aaPredicted RBP eCLIP14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 VWCEQ96DN2 955 aa14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 BACH2Q9BYV9 841 aa14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 PSTPIP2Q9H939 334 aa14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 YBX2Q9Y2T7 364 aaKnown RBP14.27□□□□□ -0.13
PDGFRA-204ENST00000504461 FRMPD4Q14CM0 1322 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 SPATA31C2B4DYI2 1134 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 KIF28PB7ZC32 967 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 H3BRB1 525 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 PIK3CDO00329 1044 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 MEIS2O14770 477 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 FIBPO43427 364 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 SEC24BO95487 1268 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 CKBP12277 381 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 IGFBP4P22692 258 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 ICAM3P32942 547 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 RCAN1P53805 252 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 PTK7Q13308 1070 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 PCNX4Q63HM2 1172 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 PPP2R2DQ66LE6 453 aa14.26□□□□□ -0.13
PDGFRA-204ENST00000504461 XRRA1Q6P2D8 792 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms