RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 PWP2Q15269 919 aaKnown RBP10.69□□□□□ -0.7
DHFR-202ENST00000504396 DUSP28Q4G0W2 176 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 BRDTQ58F21 947 aaPredicted RBP10.69□□□□□ -0.7
DHFR-202ENST00000504396 TAPT1Q6NXT6 567 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 RETREG2Q8NC44 543 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 PPP1R13LQ8WUF5 828 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 WDR11Q9BZH6 1224 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 LCTP09848 1927 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 TANC1Q9C0D5 1861 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 KIF28PB7ZC32 967 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 GFRA3O60609 400 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 ICAM1P05362 532 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 CALML3P27482 149 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 SLC16A2P36021 539 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 ALDH5A1P51649 535 aaPredicted RBP10.68□□□□□ -0.7
DHFR-202ENST00000504396 CTDSPL2Q05D32 466 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 BAATQ14032 418 aaPredicted RBP10.68□□□□□ -0.7
DHFR-202ENST00000504396 PPP2R5BQ15173 497 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 SLC9A7Q96T83 725 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 MPHOSPH6Q99547 160 aaKnown RBP10.68□□□□□ -0.7
DHFR-202ENST00000504396 MTG1Q9BT17 334 aaPredicted RBP10.68□□□□□ -0.7
DHFR-202ENST00000504396 HCN4Q9Y3Q4 1203 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 FRMPD2Q68DX3 1309 aaPredicted RBP10.68□□□□□ -0.7
DHFR-202ENST00000504396 TTC41PQ6P2S7 1318 aa10.68□□□□□ -0.7
DHFR-202ENST00000504396 ERC2O15083 957 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 BMP1P13497 986 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 KCNJ6P48051 423 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 PURAQ00577 322 aaKnown RBP10.67□□□□□ -0.7
DHFR-202ENST00000504396 RRP12Q5JTH9 1297 aaKnown RBP10.67□□□□□ -0.7
DHFR-202ENST00000504396 KRT40Q6A162 431 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 MTCH2Q9Y6C9 303 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 NCOR1O75376 2440 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 COL4A4P53420 1690 aaPredicted RBP10.67□□□□□ -0.7
DHFR-202ENST00000504396 CHD9Q3L8U1 2897 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 EPOPA6NHQ4 379 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 NFIBO00712 420 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 RFC2P35250 354 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 BFSP2Q13515 415 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 NBPF20Q3BBV1 942 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 C20orf194Q5TEA3 1177 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 SLC30A10Q6XR72 485 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 MORC4Q8TE76 937 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 DCAF4Q8WV16 495 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 INCENPQ9NQS7 918 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 IL17RBQ9NRM6 502 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 RCAN3Q9UKA8 241 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
DHFR-202ENST00000504396 MMP16P51512 607 aa10.66□□□□□ -0.7
DHFR-202ENST00000504396 SYDE2Q5VT97 1194 aa10.66□□□□□ -0.7
DHFR-202ENST00000504396 TTBK2Q6IQ55 1244 aa10.66□□□□□ -0.7
DHFR-202ENST00000504396 RNF207Q6ZRF8 634 aa10.66□□□□□ -0.7
DHFR-202ENST00000504396 HERC6Q8IVU3 1022 aa10.66□□□□□ -0.7
DHFR-202ENST00000504396 RANBP17Q9H2T7 1088 aaKnown RBP10.66□□□□□ -0.7
DHFR-202ENST00000504396 COG5Q9UP83 839 aa10.66□□□□□ -0.7
DHFR-202ENST00000504396 IQCF3P0C7M6 154 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 TAP1Q03518 808 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 NFRKBQ6P4R8 1299 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 ZNF598Q86UK7 904 aaKnown RBP10.65□□□□□ -0.7
DHFR-202ENST00000504396 CCDC155Q8N6L0 562 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 PHOSPHO2Q8TCD6 241 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 SCFD2Q8WU76 684 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 COPS5Q92905 334 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 VWCEQ96DN2 955 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 CRBNQ96SW2 442 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 MTUS1Q9ULD2 1270 aa10.65□□□□□ -0.7
DHFR-202ENST00000504396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.65□□□□□ -0.72e-8■■■□□ 17.8
DHFR-202ENST00000504396 CHD7Q9P2D1 2997 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 B4DLN1 442 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 NKRFO15226 690 aaKnown RBP eCLIP10.64□□□□□ -0.716e-9■□□□□ 11.2
DHFR-202ENST00000504396 KPNA6O60684 536 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 DXOO77932 396 aaKnown RBP10.64□□□□□ -0.71
DHFR-202ENST00000504396 ARHGEF15O94989 841 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 TXNP10599 105 aaKnown RBP10.64□□□□□ -0.71
DHFR-202ENST00000504396 NOVP48745 357 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 MRPL12P52815 198 aaKnown RBP10.64□□□□□ -0.71
DHFR-202ENST00000504396 GRB10Q13322 594 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 PTGISQ16647 500 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 USH1GQ495M9 461 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 TMEM31Q5JXX7 168 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 GDPD5Q8WTR4 605 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 EPHX3Q9H6B9 360 aa10.64□□□□□ -0.71
DHFR-202ENST00000504396 REV3LO60673 3130 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 SCN10AQ9Y5Y9 1956 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 XIRP2A4UGR9 3374 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 RBM47A0AV96 593 aaKnown RBP10.63□□□□□ -0.71
DHFR-202ENST00000504396 FAM86C2PA6NEL3 165 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 BAIAP3O94812 1187 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 TOP1P11387 765 aaKnown RBP10.63□□□□□ -0.71
DHFR-202ENST00000504396 POU3F3P20264 500 aaPredicted RBP10.63□□□□□ -0.71
DHFR-202ENST00000504396 RPS6P62753 249 aaKnown RBP10.63□□□□□ -0.71
DHFR-202ENST00000504396 LAPTM4AQ15012 233 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 BTNL9Q6UXG8 535 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 Q6ZNB5 142 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 TRIM67Q6ZTA4 783 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
DHFR-202ENST00000504396 TMCO2Q7Z6W1 182 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms