RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 ARL6IP4Q66PJ3 421 aaKnown RBP15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 KCNV1Q6PIU1 500 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 SEPT14Q6ZU15 432 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 EEPD1Q7L9B9 569 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 RAET1EQ8TD07 263 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 MTMR9Q96QG7 549 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 ZNF577Q9BSK1 485 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 TMEM60Q9H2L4 133 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 VTA1Q9NP79 307 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 KCNH7Q9NS40 1196 aa15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 MORC2Q9Y6X9 1032 aaPredicted RBP15.67■□□□□ 0.1
CYSTM1-202ENST00000504227 LCTP09848 1927 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 SPATA31C2B4DYI2 1134 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 PPP6R2O75170 966 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 RGS20O76081 388 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 ICAM3P32942 547 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 ME1P48163 572 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 DTHD1Q6ZMT9 781 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 KRI1Q8N9T8 703 aaKnown RBP15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 HAS1Q92839 578 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 FERMT2Q96AC1 680 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 ABHD16BQ9H3Z7 469 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 GDPD2Q9HCC8 539 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 KCNMB3Q9NPA1 279 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 FLRT1Q9NZU1 646 aa15.66■□□□□ 0.1
CYSTM1-202ENST00000504227 PLXNA1Q9UIW2 1896 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 TCHHQ07283 1943 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 IPO5O00410 1097 aaKnown RBP15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 FOXN1O15353 648 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 TGFB3P10600 412 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 TXKP42681 527 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 ACVR2BQ13705 512 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 TMEM266Q2M3C6 531 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 FBXO16Q8IX29 292 aaPredicted RBP15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 ETNPPLQ8TBG4 499 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 SLC5A5Q92911 643 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 UIMC1Q96RL1 719 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 RIT2Q99578 217 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 AGO4Q9HCK5 861 aaKnown RBP15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 TBC1D22BQ9NU19 505 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 PCDHA12Q9UN75 941 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 TRIM17Q9Y577 477 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 SRPRBQ9Y5M8 271 aaKnown RBP15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 MRVI1Q9Y6F6 885 aa15.65■□□□□ 0.1
CYSTM1-202ENST00000504227 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 ADCY3O60266 1144 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 CUTAO60888 179 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 HSPA1AP0DMV8 641 aaKnown RBP15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 HSPA1BP0DMV9 641 aaKnown RBP15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 HSPA8P11142 646 aaKnown RBP15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 CYP2C19P33261 490 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 CTCFP49711 727 aaPredicted RBP15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 TTLL4Q14679 1199 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 LRCH2Q5VUJ6 765 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 OTOP1Q7RTM1 612 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 GIMAP8Q8ND71 665 aaPredicted RBP15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 SCFD2Q8WU76 684 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 SDF4Q9BRK5 362 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 RAB34Q9BZG1 259 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 TTC12Q9H892 705 aaPredicted RBP15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 PKD2L1Q9P0L9 805 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 ZHX1Q9UKY1 873 aaPredicted RBP15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 MYH15Q9Y2K3 1946 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 ELP1O95163 1332 aa15.64■□□□□ 0.09
CYSTM1-202ENST00000504227 CEP350Q5VT06 3117 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 RBM47A0AV96 593 aaKnown RBP15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 VWA3AA6NCI4 1184 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 GAS7O60861 476 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 IGHA2P01877 340 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 SEMA3FQ13275 785 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 NEDD9Q14511 834 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 TAPT1Q6NXT6 567 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 TMEM87AQ8NBN3 555 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 TRIB2Q92519 343 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 SENP7Q9BQF6 1050 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 TEKT3Q9BXF9 490 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 KATNBL1Q9H079 304 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 PDGFCQ9NRA1 345 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 TCEAL9Q9UHQ7 104 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 NRBP1Q9UHY1 535 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 FBXO2Q9UK22 296 aaPredicted RBP15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 PCDHA7Q9UN72 937 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 ZSWIM8A7E2V4 1837 aa15.63■□□□□ 0.09
CYSTM1-202ENST00000504227 MCM3APO60318 1980 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 ATP9AO75110 1047 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 PRPF40AO75400 957 aaKnown RBP15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 TXNP10599 105 aaKnown RBP15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 ELNP15502 786 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 LONP1P36776 959 aaKnown RBP15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 TECP42680 631 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 FXR2P51116 673 aaKnown RBP eCLIP15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 PDIA5Q14554 519 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 IL17AQ16552 155 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 PRAMEF19Q5SWL8 479 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 IQSEC1Q6DN90 963 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 ZNF579Q8NAF0 562 aaKnown RBP15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 SLAIN1Q8ND83 568 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 PXYLP1Q8TE99 480 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 GJA10Q969M2 543 aa15.62■□□□□ 0.09
CYSTM1-202ENST00000504227 DDX41Q9UJV9 622 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms