RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 FEZF2Q8TBJ5 459 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 PIP4K2CQ8TBX8 421 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMAD1-203ENST00000502342 SREK1Q8WXA9 508 aaKnown RBP3.81□□□□□ -1.8
SMAD1-203ENST00000502342 ZBTB8AQ96BR9 441 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 DEPDC7Q96QD5 511 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 RNF38Q9H0F5 515 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 CDIP1Q9H305 208 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 SNTG2Q9NY99 539 aa3.81□□□□□ -1.8
SMAD1-203ENST00000502342 TADA3O75528 432 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 LTFP02788 710 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 C8BP07358 591 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 SRGAP2CP0DJJ0 459 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 SERINC3Q13530 473 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 RASA3Q14644 834 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 TESK1Q15569 626 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 RSPO2Q6UXX9 243 aaPredicted RBP3.8□□□□□ -1.8
SMAD1-203ENST00000502342 ETV3LQ6ZN32 361 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 LRP10Q7Z4F1 713 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 RIOX2Q8IUF8 465 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 CLEC4DQ8WXI8 215 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 EXOC2Q96KP1 924 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 GORASP1Q9BQQ3 440 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 DHRS4Q9BTZ2 278 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 EPB41L1Q9H4G0 881 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 IPPKQ9H8X2 491 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 PARD6AQ9NPB6 346 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 SPATA6Q9NWH7 488 aaPredicted RBP3.8□□□□□ -1.8
SMAD1-203ENST00000502342 PCDHB4Q9Y5E5 795 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 PCDHA9Q9Y5H5 950 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 PCDHA8Q9Y5H6 950 aa3.8□□□□□ -1.8
SMAD1-203ENST00000502342 TCRBV5S2A0A599 114 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 OTOL1A6NHN0 477 aaPredicted RBP3.79□□□□□ -1.8
SMAD1-203ENST00000502342 KRIT1O00522 736 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 NKRFO15226 690 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMAD1-203ENST00000502342 MAFKO60675 156 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 SOD2P04179 222 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 APPP05067 770 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 CYP2C8P10632 490 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 HOXA5P20719 270 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 SLC6A11P48066 632 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 GPR85P60893 370 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 SUMO1P63165 101 aaKnown RBP3.79□□□□□ -1.8
SMAD1-203ENST00000502342 BMS1Q14692 1282 aaKnown RBP3.79□□□□□ -1.8
SMAD1-203ENST00000502342 ZC3H18Q86VM9 953 aaKnown RBP3.79□□□□□ -1.8
SMAD1-203ENST00000502342 LILRB2Q8N423 598 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 CPA5Q8WXQ8 436 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 MKL1Q969V6 931 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 C20orf173Q96LM9 149 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 DRC1Q96MC2 740 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 ZFYVE21Q9BQ24 234 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 SPATA25Q9BR10 227 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 ALG1Q9BT22 464 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 SMOC1Q9H4F8 434 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 RBPJLQ9UBG7 517 aa3.79□□□□□ -1.8
SMAD1-203ENST00000502342 SMARCA5O60264 1052 aaPredicted RBP3.78□□□□□ -1.8
SMAD1-203ENST00000502342 SASH1O94885 1247 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 LRG1P02750 347 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 GNAT1P11488 350 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 GRK2P25098 689 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 GRK3P35626 688 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 KCNC1P48547 511 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 SARSP49591 514 aaKnown RBP3.78□□□□□ -1.8
SMAD1-203ENST00000502342 SLURP1P55000 103 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 NKX3-2P78367 333 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 GUCY1A3Q02108 690 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 SPIRE1Q08AE8 756 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 KIZQ2M2Z5 673 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 CR1LQ2VPA4 569 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 VWA3BQ502W6 1294 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 PHF19Q5T6S3 580 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 STYK1Q6J9G0 422 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 OTOP3Q7RTS5 596 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 MTDHQ86UE4 582 aaKnown RBP3.78□□□□□ -1.8
SMAD1-203ENST00000502342 OSTM1Q86WC4 334 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 FAM126BQ8IXS8 530 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 Q8N1Y9 231 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 LINC01356Q8N9X3 169 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.78□□□□□ -1.8
SMAD1-203ENST00000502342 PTPRN2Q92932 1015 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 TOE1Q96GM8 510 aaKnown RBP3.78□□□□□ -1.8
SMAD1-203ENST00000502342 ZSWIM3Q96MP5 696 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 KCNC2Q96PR1 638 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 C11orf84Q9BUA3 381 aaPredicted RBP3.78□□□□□ -1.8
SMAD1-203ENST00000502342 OSBPL2Q9H1P3 480 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 SLC6A20Q9NP91 592 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 CATSPERZQ9NTU4 200 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 MYOTQ9UBF9 498 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 NDOR1Q9UHB4 597 aa3.78□□□□□ -1.8
SMAD1-203ENST00000502342 CDK11AQ9UQ88 783 aaPredicted RBP3.78□□□□□ -1.8
SMAD1-203ENST00000502342 FAM47E-STBD1D6RA91 191 aa3.77□□□□□ -1.81
SMAD1-203ENST00000502342 DDX3XO00571 662 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMAD1-203ENST00000502342 AQP7O14520 342 aa3.77□□□□□ -1.81
SMAD1-203ENST00000502342 KCNK3O14649 394 aa3.77□□□□□ -1.81
SMAD1-203ENST00000502342 C6orf222P0C671 652 aaPredicted RBP3.77□□□□□ -1.81
SMAD1-203ENST00000502342 PYGMP11217 842 aa3.77□□□□□ -1.81
SMAD1-203ENST00000502342 DNM2P50570 870 aa3.77□□□□□ -1.81
SMAD1-203ENST00000502342 HTRA3P83110 453 aa3.77□□□□□ -1.81
SMAD1-203ENST00000502342 DLX2Q07687 328 aaPredicted RBP3.77□□□□□ -1.81
SMAD1-203ENST00000502342 TUSC3Q13454 348 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms