RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
SMAD1-203ENST00000502342 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
SMAD1-203ENST00000502342 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
SMAD1-203ENST00000502342 SENP3Q9H4L4 574 aaPredicted RBP12.32□□□□□ -0.44
SMAD1-203ENST00000502342 FOXD1Q16676 465 aa11.51□□□□□ -0.57
SMAD1-203ENST00000502342 PLPPR3Q6T4P5 718 aa11.42□□□□□ -0.58
SMAD1-203ENST00000502342 ADRA2BP18089 450 aa11.06□□□□□ -0.64
SMAD1-203ENST00000502342 PPP6R1Q9UPN7 881 aa11.06□□□□□ -0.64
SMAD1-203ENST00000502342 PIAS4Q8N2W9 510 aaPredicted RBP10.83□□□□□ -0.68
SMAD1-203ENST00000502342 MSH5O43196 834 aa10.57□□□□□ -0.72
SMAD1-203ENST00000502342 PPP4R3CPQ6ZMV5 832 aa10.11□□□□□ -0.79
SMAD1-203ENST00000502342 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
SMAD1-203ENST00000502342 SCAF1Q9H7N4 1312 aaKnown RBP10.03□□□□□ -0.8
SMAD1-203ENST00000502342 POTEDQ86YR6 584 aa9.83□□□□□ -0.84
SMAD1-203ENST00000502342 DMRT2Q9Y5R5 561 aa9.82□□□□□ -0.84
SMAD1-203ENST00000502342 KCNA4P22459 653 aa9.8□□□□□ -0.84
SMAD1-203ENST00000502342 CNKSR2Q8WXI2 1034 aa9.8□□□□□ -0.84
SMAD1-203ENST00000502342 NCBP3Q53F19 620 aaKnown RBP9.78□□□□□ -0.84
SMAD1-203ENST00000502342 NPM3O75607 178 aaKnown RBP9.66□□□□□ -0.86
SMAD1-203ENST00000502342 RNF216Q9NWF9 866 aaPredicted RBP9.61□□□□□ -0.87
SMAD1-203ENST00000502342 HOXD11P31277 338 aaPredicted RBP9.58□□□□□ -0.88
SMAD1-203ENST00000502342 DCAF8L1A6NGE4 600 aa9.53□□□□□ -0.88
SMAD1-203ENST00000502342 SLC4A1APQ9BWU0 796 aaKnown RBP9.3□□□□□ -0.92
SMAD1-203ENST00000502342 DNAJC5BQ9UF47 199 aa9.23□□□□□ -0.93
SMAD1-203ENST00000502342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMAD1-203ENST00000502342 SLC4A2P04920 1241 aa9.15□□□□□ -0.94
SMAD1-203ENST00000502342 RNF39Q9H2S5 420 aa9.07□□□□□ -0.96
SMAD1-203ENST00000502342 ZBTB22O15209 634 aa9.01□□□□□ -0.97
SMAD1-203ENST00000502342 EHMT2Q96KQ7 1210 aa9.01□□□□□ -0.97
SMAD1-203ENST00000502342 U3KPZ7 1027 aaPredicted RBP9.01□□□□□ -0.97
SMAD1-203ENST00000502342 FOXD4L1Q9NU39 408 aa8.98□□□□□ -0.97
SMAD1-203ENST00000502342 CACNB1Q02641 598 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-203ENST00000502342 C1QBPQ07021 282 aaKnown RBP8.94□□□□□ -0.98
SMAD1-203ENST00000502342 CSRNP3Q8WYN3 585 aa8.9□□□□□ -0.98
SMAD1-203ENST00000502342 MYCNP04198 464 aaPredicted RBP8.89□□□□□ -0.99
SMAD1-203ENST00000502342 SPINK5Q9NQ38 1064 aaPredicted RBP8.84□□□□□ -0.99
SMAD1-203ENST00000502342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.82□□□□□ -1
SMAD1-203ENST00000502342 HNRNPUL2Q1KMD3 747 aaKnown RBP8.82□□□□□ -1
SMAD1-203ENST00000502342 CAPN15O75808 1086 aa8.81□□□□□ -1
SMAD1-203ENST00000502342 SAMD1Q6SPF0 538 aaPredicted RBP8.8□□□□□ -1
SMAD1-203ENST00000502342 TRHP20396 242 aaPredicted RBP8.78□□□□□ -1
SMAD1-203ENST00000502342 ATF5Q9Y2D1 282 aaPredicted RBP8.75□□□□□ -1.01
SMAD1-203ENST00000502342 APLP2Q06481 763 aa8.73□□□□□ -1.01
SMAD1-203ENST00000502342 ABCB7O75027 752 aa8.66□□□□□ -1.02
SMAD1-203ENST00000502342 ZNF219Q9P2Y4 722 aaPredicted RBP8.65□□□□□ -1.02
SMAD1-203ENST00000502342 DSG3P32926 999 aa8.64□□□□□ -1.03
SMAD1-203ENST00000502342 ATXN8OSP0DMR3 200 aa8.63□□□□□ -1.03
SMAD1-203ENST00000502342 POLA2Q14181 598 aa8.59□□□□□ -1.03
SMAD1-203ENST00000502342 MKRN4PQ13434 485 aaPredicted RBP8.33□□□□□ -1.08
SMAD1-203ENST00000502342 FBLN2P98095 1184 aa8.32□□□□□ -1.08
SMAD1-203ENST00000502342 ZBTB12Q9Y330 459 aaPredicted RBP8.32□□□□□ -1.08
SMAD1-203ENST00000502342 OSCARQ8IYS5 282 aa8.27□□□□□ -1.09
SMAD1-203ENST00000502342 RBM42Q9BTD8 480 aaKnown RBP8.17□□□□□ -1.1
SMAD1-203ENST00000502342 ZNF692Q9BU19 519 aaPredicted RBP8.16□□□□□ -1.1
SMAD1-203ENST00000502342 SPDYE2BA6NHP3 402 aa8.13□□□□□ -1.11
SMAD1-203ENST00000502342 SPDYE6P0CI01 402 aa8.13□□□□□ -1.11
SMAD1-203ENST00000502342 SPDYE2Q495Y8 402 aa8.13□□□□□ -1.11
SMAD1-203ENST00000502342 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
SMAD1-203ENST00000502342 AKT1S1Q96B36 256 aa8.08□□□□□ -1.12
SMAD1-203ENST00000502342 FKBP8Q14318 412 aa8.07□□□□□ -1.12
SMAD1-203ENST00000502342 REM2Q8IYK8 340 aaPredicted RBP8.05□□□□□ -1.12
SMAD1-203ENST00000502342 SSUH2Q9Y2M2 353 aa8.05□□□□□ -1.12
SMAD1-203ENST00000502342 PABPN1Q86U42 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMAD1-203ENST00000502342 CLEC11AQ9Y240 323 aa7.99□□□□□ -1.13
SMAD1-203ENST00000502342 PITPNM1O00562 1244 aa7.95□□□□□ -1.14
SMAD1-203ENST00000502342 SPDYE1Q8NFV5 336 aaPredicted RBP7.92□□□□□ -1.14
SMAD1-203ENST00000502342 CHRDL2Q6WN34 429 aa7.91□□□□□ -1.14
SMAD1-203ENST00000502342 PRR29P0C7W0 189 aa7.87□□□□□ -1.15
SMAD1-203ENST00000502342 PROM2Q8N271 834 aa7.86□□□□□ -1.15
SMAD1-203ENST00000502342 STAG3Q9UJ98 1225 aa7.83□□□□□ -1.16
SMAD1-203ENST00000502342 PIP4P2Q8N4L2 257 aa7.82□□□□□ -1.16
SMAD1-203ENST00000502342 CHADLQ6NUI6 762 aa7.81□□□□□ -1.16
SMAD1-203ENST00000502342 FXR2P51116 673 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMAD1-203ENST00000502342 PRKAR2AP13861 404 aaKnown RBP7.77□□□□□ -1.17
SMAD1-203ENST00000502342 POTEHQ6S545 545 aa7.77□□□□□ -1.17
SMAD1-203ENST00000502342 MIER1Q8N108 512 aa7.74□□□□□ -1.17
SMAD1-203ENST00000502342 CREBZFQ9NS37 354 aa7.73□□□□□ -1.17
SMAD1-203ENST00000502342 FBXO3Q9UK99 471 aa7.73□□□□□ -1.17
SMAD1-203ENST00000502342 PLCD3Q8N3E9 789 aa7.7□□□□□ -1.18
SMAD1-203ENST00000502342 FARP1Q9Y4F1 1045 aaPredicted RBP7.66□□□□□ -1.18
SMAD1-203ENST00000502342 PLEKHG5O94827 1062 aa7.64□□□□□ -1.19
SMAD1-203ENST00000502342 VASPP50552 380 aaPredicted RBP7.64□□□□□ -1.19
SMAD1-203ENST00000502342 HAX1O00165 279 aa7.63□□□□□ -1.19
SMAD1-203ENST00000502342 KLHL34Q8N239 644 aa7.62□□□□□ -1.19
SMAD1-203ENST00000502342 MNX1P50219 401 aaPredicted RBP7.61□□□□□ -1.19
SMAD1-203ENST00000502342 EVX2Q03828 476 aa7.58□□□□□ -1.2
SMAD1-203ENST00000502342 NPM1P06748 294 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMAD1-203ENST00000502342 IFNLR1Q8IU57 520 aaPredicted RBP7.57□□□□□ -1.2
SMAD1-203ENST00000502342 C19orf67A6NJJ6 358 aa7.53□□□□□ -1.2
SMAD1-203ENST00000502342 CD44P16070 742 aaKnown RBP7.53□□□□□ -1.2
SMAD1-203ENST00000502342 TSPYL2Q9H2G4 693 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-203ENST00000502342 ZBTB47Q9UFB7 747 aaPredicted RBP7.52□□□□□ -1.21
SMAD1-203ENST00000502342 NUBP1P53384 320 aa7.5□□□□□ -1.21
SMAD1-203ENST00000502342 RASEFQ8IZ41 740 aa7.5□□□□□ -1.21
SMAD1-203ENST00000502342 ZRANB1Q9UGI0 708 aa7.5□□□□□ -1.21
SMAD1-203ENST00000502342 DCAF8Q5TAQ9 597 aa7.49□□□□□ -1.21
SMAD1-203ENST00000502342 SPOCK2Q92563 424 aa7.47□□□□□ -1.21
SMAD1-203ENST00000502342 PAK3O75914 559 aaPredicted RBP7.46□□□□□ -1.22
SMAD1-203ENST00000502342 CIZ1Q9ULV3 898 aaPredicted RBP7.44□□□□□ -1.22
SMAD1-203ENST00000502342 PHF12Q96QT6 1004 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms