RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 MTMR1Q13613 665 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 SLC39A14Q15043 492 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 TRIB2Q92519 343 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 KCNH7Q9NS40 1196 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 RCOR1Q9UKL0 485 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 LAD1O00515 517 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 TBX3O15119 743 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 MSH4O15457 936 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 MAFGO15525 162 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 ICAM3P32942 547 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 GNPTABQ3T906 1256 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 EEPD1Q7L9B9 569 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 NLRX1Q86UT6 975 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 FBXO16Q8IX29 292 aaPredicted RBP22.15■■□□□ 1.14
LINC01550-201ENST00000499006 TRMT44Q8IYL2 757 aaKnown RBP22.15■■□□□ 1.14
LINC01550-201ENST00000499006 HAS1Q92839 578 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 SCAND2PQ9GZW5 306 aaPredicted RBP22.15■■□□□ 1.14
LINC01550-201ENST00000499006 ABHD16BQ9H3Z7 469 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 VTA1Q9NP79 307 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 TRIM17Q9Y577 477 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 MRVI1Q9Y6F6 885 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 SPATA31C2B4DYI2 1134 aa22.14■■□□□ 1.13
LINC01550-201ENST00000499006 NCLP19338 710 aaKnown RBP22.14■■□□□ 1.13
LINC01550-201ENST00000499006 CTCFP49711 727 aaPredicted RBP22.14■■□□□ 1.13
LINC01550-201ENST00000499006 CALCRLQ16602 461 aa22.14■■□□□ 1.13
LINC01550-201ENST00000499006 TAPT1Q6NXT6 567 aa22.14■■□□□ 1.13
LINC01550-201ENST00000499006 FIBPO43427 364 aa22.13■■□□□ 1.13
LINC01550-201ENST00000499006 OR52Z1P0C646 297 aa22.13■■□□□ 1.13
LINC01550-201ENST00000499006 CYP2C19P33261 490 aa22.13■■□□□ 1.13
LINC01550-201ENST00000499006 PRPHP41219 470 aa22.13■■□□□ 1.13
LINC01550-201ENST00000499006 SEPT14Q6ZU15 432 aa22.13■■□□□ 1.13
LINC01550-201ENST00000499006 PXYLP1Q8TE99 480 aa22.13■■□□□ 1.13
LINC01550-201ENST00000499006 LEO1Q8WVC0 666 aaPredicted RBP22.13■■□□□ 1.13
LINC01550-201ENST00000499006 CDHR1Q96JP9 859 aa22.13■■□□□ 1.13
LINC01550-201ENST00000499006 FAM20AQ96MK3 541 aa22.13■■□□□ 1.13
LINC01550-201ENST00000499006 AGO4Q9HCK5 861 aaKnown RBP22.13■■□□□ 1.13
LINC01550-201ENST00000499006 RBM47A0AV96 593 aaKnown RBP22.12■■□□□ 1.13
LINC01550-201ENST00000499006 SPTLC2O15270 562 aa22.12■■□□□ 1.13
LINC01550-201ENST00000499006 PPP6R2O75170 966 aa22.12■■□□□ 1.13
LINC01550-201ENST00000499006 LBX1P52954 281 aa22.12■■□□□ 1.13
LINC01550-201ENST00000499006 ACVR2BQ13705 512 aa22.12■■□□□ 1.13
LINC01550-201ENST00000499006 STK38Q15208 465 aa22.12■■□□□ 1.13
LINC01550-201ENST00000499006 ARL6IP4Q66PJ3 421 aaKnown RBP22.12■■□□□ 1.13
LINC01550-201ENST00000499006 RAET1EQ8TD07 263 aa22.12■■□□□ 1.13
LINC01550-201ENST00000499006 SLC5A5Q92911 643 aa22.12■■□□□ 1.13
LINC01550-201ENST00000499006 IPO5O00410 1097 aaKnown RBP22.11■■□□□ 1.13
LINC01550-201ENST00000499006 ADCY3O60266 1144 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 ATP9AO75110 1047 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 ZNF865P0CJ78 1059 aaPredicted RBP22.11■■□□□ 1.13
LINC01550-201ENST00000499006 TGFB3P10600 412 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 CCDC62Q6P9F0 684 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 SLFN12Q8IYM2 578 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 KCNG4Q8TDN1 519 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 GJA10Q969M2 543 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 SPATA32Q96LK8 384 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 ZNF577Q9BSK1 485 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 GDPD2Q9HCC8 539 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 PDGFCQ9NRA1 345 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 NRBP1Q9UHY1 535 aa22.11■■□□□ 1.13
LINC01550-201ENST00000499006 ELNP15502 786 aa22.1■■□□□ 1.13
LINC01550-201ENST00000499006 KCNA2P16389 499 aa22.1■■□□□ 1.13
LINC01550-201ENST00000499006 MARCKSP29966 332 aaPredicted RBP22.1■■□□□ 1.13
LINC01550-201ENST00000499006 SP2Q02086 613 aa22.1■■□□□ 1.13
LINC01550-201ENST00000499006 IL17AQ16552 155 aa22.1■■□□□ 1.13
LINC01550-201ENST00000499006 PRAMEF19Q5SWL8 479 aa22.1■■□□□ 1.13
LINC01550-201ENST00000499006 MFSD14CQ5VZR4 134 aa22.1■■□□□ 1.13
LINC01550-201ENST00000499006 KCNV1Q6PIU1 500 aa22.1■■□□□ 1.13
LINC01550-201ENST00000499006 SCFD2Q8WU76 684 aa22.1■■□□□ 1.13
LINC01550-201ENST00000499006 DHX15O43143 795 aaKnown RBP22.09■■□□□ 1.13
LINC01550-201ENST00000499006 PSMD10O75832 226 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 ARIH2O95376 493 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 ITGB3BPQ13352 177 aaPredicted RBP22.09■■□□□ 1.13
LINC01550-201ENST00000499006 GBP4Q96PP9 640 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 UIMC1Q96RL1 719 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 SENP7Q9BQF6 1050 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 DDX41Q9UJV9 622 aaKnown RBP22.09■■□□□ 1.13
LINC01550-201ENST00000499006 FBXO2Q9UK22 296 aaPredicted RBP22.09■■□□□ 1.13
LINC01550-201ENST00000499006 PTPN22Q9Y2R2 807 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 PTCH2Q9Y6C5 1203 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 ELP1O95163 1332 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 HMGCRP04035 888 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 CYBAP13498 195 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 TXKP42681 527 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 TMEM87AQ8NBN3 555 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 SLAIN1Q8ND83 568 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 FERMT2Q96AC1 680 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 RIT2Q99578 217 aa22.09■■□□□ 1.13
LINC01550-201ENST00000499006 SRPRBQ9Y5M8 271 aaKnown RBP22.09■■□□□ 1.13
LINC01550-201ENST00000499006 NFASCO94856 1347 aa22.08■■□□□ 1.13
LINC01550-201ENST00000499006 FRMPD3Q5JV73 1810 aa22.08■■□□□ 1.12
LINC01550-201ENST00000499006 CACNB2Q08289 660 aaPredicted RBP22.08■■□□□ 1.12
LINC01550-201ENST00000499006 TRIM32Q13049 653 aa22.08■■□□□ 1.12
LINC01550-201ENST00000499006 TTLL4Q14679 1199 aa22.08■■□□□ 1.12
LINC01550-201ENST00000499006 CCDC144BQ3MJ40 725 aa22.08■■□□□ 1.12
LINC01550-201ENST00000499006 MAP3K21Q5TCX8 1036 aa22.08■■□□□ 1.12
LINC01550-201ENST00000499006 TRPV1Q8NER1 839 aa22.08■■□□□ 1.12
LINC01550-201ENST00000499006 TTC12Q9H892 705 aaPredicted RBP22.08■■□□□ 1.12
LINC01550-201ENST00000499006 VAV3Q9UKW4 847 aa22.08■■□□□ 1.12
LINC01550-201ENST00000499006 ZHX1Q9UKY1 873 aaPredicted RBP22.08■■□□□ 1.12
LINC01550-201ENST00000499006 PCDHA12Q9UN75 941 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms