RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	ACLY	P53396	1101 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	ANTXR2	P58335	489 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	KRT32	Q14532	448 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	PPP2R5B	Q15173	497 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	PWP2	Q15269	919 aa	Known RBP	12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	BRDT	Q58F21	947 aa	Predicted RBP	12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	GNAS	Q5JWF2	1037 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	TMTC2	Q8N394	836 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	DNER	Q8NFT8	737 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	CLEC4D	Q8WXI8	215 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	PURB	Q96QR8	312 aa	Known RBP	12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	TSEN34	Q9BSV6	310 aa	Known RBP	12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	MYL10	Q9BUA6	226 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	UBE2O	Q9C0C9	1292 aa	Known RBP	12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	PKD2L1	Q9P0L9	805 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	PHF24	Q9UPV7	400 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	PCDHA1	Q9Y5I3	950 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	SLC12A7	Q9Y666	1083 aa		12.35	□□□□□ -0.43
CDK11A-222	ENST00000498810	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	REC8	O95072	547 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	CD2BP2	O95400	341 aa	Known RBP	12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	MAGEA10	P43363	369 aa	Predicted RBP	12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	GNAQ	P50148	359 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	KCNA10	Q16322	511 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	ARHGEF16	Q5VV41	709 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	MICU3	Q86XE3	530 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	SPIRE2	Q8WWL2	714 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	RRP36	Q96EU6	259 aa	Known RBP	12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	NEK1	Q96PY6	1258 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	PIGS	Q96S52	555 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	MTA3	Q9BTC8	594 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	LRRC2	Q9BYS8	371 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	LY9	Q9HBG7	655 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	SENP2	Q9HC62	589 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	PPP4R2	Q9NY27	417 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	DDX49	Q9Y6V7	483 aa	Known RBP	12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	MYH7B	A7E2Y1	1941 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	MROH7	Q68CQ1	1323 aa		12.34	□□□□□ -0.43
CDK11A-222	ENST00000498810	TRIOBP	Q9H2D6	2365 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	PALM3	A6NDB9	673 aa	Predicted RBP	12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	MYADML2	A6NDP7	307 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	DCDC2C	A8MYV0	355 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	SH2B2	O14492	632 aa	Predicted RBP	12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	TLR3	O15455	904 aa	Known RBP	12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	DYNC1LI2	O43237	492 aa	Predicted RBP	12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	ASGR1	P07306	291 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	EIF2AK2	P19525	551 aa	Known RBP	12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	GJA9	P57773	515 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	BEX3	Q00994	111 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	FSCN1	Q16658	493 aa	Known RBP	12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	IQSEC1	Q6DN90	963 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	RAB11FIP4	Q86YS3	637 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	OR6J1	Q8NGC5	347 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	NSUN6	Q8TEA1	469 aa	Known RBP	12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	SCFD2	Q8WU76	684 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	CUL5	Q93034	780 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	RMDN3	Q96TC7	470 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	WDR11	Q9BZH6	1224 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	PDGFC	Q9NRA1	345 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	ASTN1	O14525	1302 aa		12.33	□□□□□ -0.44
CDK11A-222	ENST00000498810	PNMA6F	A0A0J9YX94	578 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810		A0A0U1RQG5	324 aa	Predicted RBP	12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	TNFRSF10A	O00220	468 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	ADCY6	O43306	1168 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	HMGB1	P09429	215 aa	Known RBP	12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	CLTB	P09497	229 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	SMPD1	P17405	629 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	RXRA	P19793	462 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	CST5	P28325	142 aa	Predicted RBP	12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	CPT1A	P50416	773 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	TROAP	Q12815	778 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	TTLL4	Q14679	1199 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	NECTIN1	Q15223	517 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	RGS22	Q8NE09	1264 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	IGDCC4	Q8TDY8	1250 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	LZTS2	Q9BRK4	669 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	MAF1	Q9H063	256 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	KATNBL1	Q9H079	304 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	UPF3A	Q9H1J1	476 aa	Known RBP	12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810	PCDHGC3	Q9UN70	934 aa		12.32	□□□□□ -0.44
CDK11A-222	ENST00000498810		A0A1W2PPC1	479 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	NKRF	O15226	690 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	MYL3	P08590	195 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	POLR2M	P0CAP2	368 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	TXN	P10599	105 aa	Known RBP	12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	MYCL	P12524	364 aa	Predicted RBP	12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	HOXA13	P31271	388 aa	Predicted RBP	12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	LIFR	P42702	1097 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	CHMP4BP1	P59074	171 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	TLE2	Q04725	743 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	STXBP2	Q15833	593 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	SEPT14	Q6ZU15	432 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	FCHSD1	Q86WN1	690 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	PARP9	Q8IXQ6	854 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	KLHDC9	Q8NEP7	349 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	SMARCC2	Q8TAQ2	1214 aa		12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	SYMPK	Q92797	1274 aa	Known RBP	12.31	□□□□□ -0.44
CDK11A-222	ENST00000498810	MAP3K14	Q99558	947 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms