RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 TDP2O95551 362 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 FAM86B2P0C5J1 330 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 TXNP10599 105 aaKnown RBP12.98□□□□□ -0.33
CTTN-208ENST00000498223 GCFC2P16383 781 aaKnown RBP12.98□□□□□ -0.33
CTTN-208ENST00000498223 ADCYAP1R1P41586 468 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 TRAPPC10P48553 1259 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 SETQ01105 290 aaPredicted RBP12.98□□□□□ -0.33
CTTN-208ENST00000498223 TNFAIP2Q03169 654 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 CCDC144BQ3MJ40 725 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 KCNV1Q6PIU1 500 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 CYP2W1Q8TAV3 490 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 JADE2Q9NQC1 790 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 NRBP1Q9UHY1 535 aa12.98□□□□□ -0.33
CTTN-208ENST00000498223 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
CTTN-208ENST00000498223 SORBS3O60504 671 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 NEMFO60524 1076 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 BRD1O95696 1058 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 ZNF865P0CJ78 1059 aaPredicted RBP12.97□□□□□ -0.33
CTTN-208ENST00000498223 ARP10275 920 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 CYBAP13498 195 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 AKR1A1P14550 325 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 ITGB5P18084 799 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 CCND3P30281 292 aaPredicted RBP12.97□□□□□ -0.33
CTTN-208ENST00000498223 CIITAP33076 1130 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 CEBPZQ03701 1054 aaKnown RBP12.97□□□□□ -0.33
CTTN-208ENST00000498223 NBR1Q14596 966 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 MTFR1Q15390 333 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 LY6KQ17RY6 165 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 IQSEC1Q6DN90 963 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 TAPT1Q6NXT6 567 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 FAM173BQ6P4H8 233 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 MOXD1Q6UVY6 613 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 NIPA1Q7RTP0 329 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 ZNF396Q96N95 335 aaPredicted RBP12.97□□□□□ -0.33
CTTN-208ENST00000498223 INPP4AQ96PE3 977 aaPredicted RBP12.97□□□□□ -0.33
CTTN-208ENST00000498223 ZNF577Q9BSK1 485 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 CHMP5Q9NZZ3 219 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 TCEAL9Q9UHQ7 104 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 ATP6V1DQ9Y5K8 247 aa12.97□□□□□ -0.33
CTTN-208ENST00000498223 CYP3A7-CYP3A51PA0A087WV96 503 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.96□□□□□ -0.33
CTTN-208ENST00000498223 SPATA31C2B4DYI2 1134 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 MEIS1O00470 390 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 MAFGO15525 162 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
CTTN-208ENST00000498223 GJB1P08034 283 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 NCLP19338 710 aaKnown RBP12.96□□□□□ -0.33
CTTN-208ENST00000498223 CYP3A7P24462 503 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 TOB1P50616 345 aaPredicted RBP12.96□□□□□ -0.33
CTTN-208ENST00000498223 SP4Q02446 784 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 CALCRLQ16602 461 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 DHX37Q8IY37 1157 aaKnown RBP12.96□□□□□ -0.33
CTTN-208ENST00000498223 TRPV1Q8NER1 839 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 CRYGNQ8WXF5 182 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 SDF4Q9BRK5 362 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 KATNBL1Q9H079 304 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 RNF208Q9H0X6 261 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 UNC93B1Q9H1C4 597 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 MLXIPQ9HAP2 919 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 KCNH7Q9NS40 1196 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 CEP131Q9UPN4 1083 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 PCDHB6Q9Y5E3 794 aa12.96□□□□□ -0.33
CTTN-208ENST00000498223 IGLV3-22A0A075B6J6 115 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 RBM47A0AV96 593 aaKnown RBP12.95□□□□□ -0.34
CTTN-208ENST00000498223 DDX39AO00148 427 aaKnown RBP12.95□□□□□ -0.34
CTTN-208ENST00000498223 IPO5O00410 1097 aaKnown RBP12.95□□□□□ -0.34
CTTN-208ENST00000498223 WNT7AO00755 349 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 NKRFO15226 690 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTTN-208ENST00000498223 SEPT4O43236 478 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 SLC37A4O43826 429 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 EDIL3O43854 480 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 RGS20O76081 388 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 GH1P01241 217 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 IGHA2P01877 340 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 TGFB3P10600 412 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 RARBP10826 455 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 CCL5P13501 91 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 ICAM3P32942 547 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 GJA8P48165 433 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 NEDD9Q14511 834 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 Q4G0T1 1027 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
CTTN-208ENST00000498223 GIMAP8Q8ND71 665 aaPredicted RBP12.95□□□□□ -0.34
CTTN-208ENST00000498223 OR6J1Q8NGC5 347 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.95□□□□□ -0.343e-7■■■■□ 23.4
CTTN-208ENST00000498223 AGO4Q9HCK5 861 aaKnown RBP12.95□□□□□ -0.34
CTTN-208ENST00000498223 TFIP11Q9UBB9 837 aaKnown RBP12.95□□□□□ -0.34
CTTN-208ENST00000498223 DDX41Q9UJV9 622 aaKnown RBP12.95□□□□□ -0.34
CTTN-208ENST00000498223 ZDHHC9Q9Y397 364 aa12.95□□□□□ -0.34
CTTN-208ENST00000498223 MSH4O15457 936 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 DYNC1LI2O43237 492 aaPredicted RBP12.94□□□□□ -0.34
CTTN-208ENST00000498223 ARIH2O95376 493 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 GGPS1O95749 300 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 SMPD1P17405 629 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 DDIT3P35638 169 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms