RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 TRIP12Q14669 1992 aaPredicted RBP23.49■■□□□ 1.35
LMBR1-219ENST00000498034 HAS3O00219 553 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 F2P00734 622 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 MYOGP15173 224 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 SMARCA1P28370 1054 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 MRPS9P82933 396 aaKnown RBP23.48■■□□□ 1.35
LMBR1-219ENST00000498034 KIAA0753Q2KHM9 967 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 C7orf31Q8N865 590 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 DHX38Q92620 1227 aaKnown RBP23.48■■□□□ 1.35
LMBR1-219ENST00000498034 LZTS2Q9BRK4 669 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 KATNAL1Q9BW62 490 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 FTOQ9C0B1 505 aaKnown RBP eCLIP23.48■■□□□ 1.35
LMBR1-219ENST00000498034 BCAS3Q9H6U6 928 aa23.48■■□□□ 1.35
LMBR1-219ENST00000498034 PPFIA4O75335 1185 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 TGFB3P10600 412 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 HOXD8P13378 290 aaPredicted RBP23.47■■□□□ 1.35
LMBR1-219ENST00000498034 ATP2A2P16615 1042 aaKnown RBP23.47■■□□□ 1.35
LMBR1-219ENST00000498034 LIFRP42702 1097 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 USP17L6PQ6QN14 398 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 CCDC155Q8N6L0 562 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 MLXIPQ9HAP2 919 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 SLC28A3Q9HAS3 691 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 RTEL1Q9NZ71 1219 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 SEC63Q9UGP8 760 aaKnown RBP23.47■■□□□ 1.35
LMBR1-219ENST00000498034 FRMPD4Q14CM0 1322 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 CDH23Q9H251 3354 aa23.47■■□□□ 1.35
LMBR1-219ENST00000498034 ACTN1P12814 892 aa23.46■■□□□ 1.35
LMBR1-219ENST00000498034 GNAQP50148 359 aa23.46■■□□□ 1.35
LMBR1-219ENST00000498034 SMARCC2Q8TAQ2 1214 aa23.46■■□□□ 1.35
LMBR1-219ENST00000498034 CAGE1Q8TC20 777 aa23.46■■□□□ 1.35
LMBR1-219ENST00000498034 GAS2L1Q99501 681 aaPredicted RBP23.46■■□□□ 1.35
LMBR1-219ENST00000498034 MEIS2O14770 477 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 CALM1P0DP23 149 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 CALM2P0DP24 149 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 CALM3P0DP25 149 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 ZNF200P98182 395 aaPredicted RBP23.45■■□□□ 1.34
LMBR1-219ENST00000498034 GPNMBQ14956 572 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 USP38Q8NB14 1042 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 AFAP1L1Q8TED9 768 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 CUL5Q93034 780 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 INPP4AQ96PE3 977 aaPredicted RBP23.45■■□□□ 1.34
LMBR1-219ENST00000498034 PCDHA11Q9Y5I1 949 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 SLC12A7Q9Y666 1083 aa23.45■■□□□ 1.34
LMBR1-219ENST00000498034 TET1Q8NFU7 2136 aa23.44■■□□□ 1.34
LMBR1-219ENST00000498034 hCG_1642624A0A1W2PR95 340 aa23.44■■□□□ 1.34
LMBR1-219ENST00000498034 SEMA3FQ13275 785 aa23.44■■□□□ 1.34
LMBR1-219ENST00000498034 HIC1Q14526 733 aa23.44■■□□□ 1.34
LMBR1-219ENST00000498034 GNPTABQ3T906 1256 aa23.44■■□□□ 1.34
LMBR1-219ENST00000498034 CCDC82Q8N4S0 544 aa23.44■■□□□ 1.34
LMBR1-219ENST00000498034 C16orf70Q9BSU1 422 aa23.44■■□□□ 1.34
LMBR1-219ENST00000498034 COL25A1Q9BXS0 654 aaPredicted RBP23.44■■□□□ 1.34
LMBR1-219ENST00000498034 RBAK-RBAKDNI3L0D1 243 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 STAM2O75886 525 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 CKBP12277 381 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 SELPP16109 830 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 ICAM3P32942 547 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 ADGRE1Q14246 886 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 LRRC8DQ7L1W4 858 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 FANCBQ8NB91 859 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 WNT8BQ93098 351 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 DOCK5Q9H7D0 1870 aa23.43■■□□□ 1.34
LMBR1-219ENST00000498034 SPATA31C2B4DYI2 1134 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 PIK3CDO00329 1044 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 RBL2Q08999 1139 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 PTK7Q13308 1070 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 RNF20Q5VTR2 975 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 PPP2R2DQ66LE6 453 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 CYFIP1Q7L576 1253 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 SGMS1Q86VZ5 419 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 MICU3Q86XE3 530 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 PPM1EQ8WY54 764 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 NEK1Q96PY6 1258 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 SLC9A7Q96T83 725 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 EYSQ5T1H1 3165 aa23.42■■□□□ 1.34
LMBR1-219ENST00000498034 FIBPO43427 364 aa23.41■■□□□ 1.34
LMBR1-219ENST00000498034 TRIM71Q2Q1W2 868 aaKnown RBP23.41■■□□□ 1.34
LMBR1-219ENST00000498034 PCNX4Q63HM2 1172 aa23.41■■□□□ 1.34
LMBR1-219ENST00000498034 TMTC3Q6ZXV5 915 aa23.41■■□□□ 1.34
LMBR1-219ENST00000498034 TCEANC2Q96MN5 208 aa23.41■■□□□ 1.34
LMBR1-219ENST00000498034 PSTPIP2Q9H939 334 aa23.41■■□□□ 1.34
LMBR1-219ENST00000498034 H3BRB1 525 aa23.4■■□□□ 1.34
LMBR1-219ENST00000498034 NOP56O00567 594 aaKnown RBP23.4■■□□□ 1.34
LMBR1-219ENST00000498034 NBNO60934 754 aa23.4■■□□□ 1.34
LMBR1-219ENST00000498034 LGALS2P05162 132 aa23.4■■□□□ 1.34
LMBR1-219ENST00000498034 IGFBP4P22692 258 aa23.4■■□□□ 1.34
LMBR1-219ENST00000498034 NEDD9Q14511 834 aa23.4■■□□□ 1.34
LMBR1-219ENST00000498034 RASEFQ8IZ41 740 aa23.4■■□□□ 1.34
LMBR1-219ENST00000498034 TUT1Q9H6E5 874 aaKnown RBP23.4■■□□□ 1.34
LMBR1-219ENST00000498034 TELO2Q9Y4R8 837 aa23.4■■□□□ 1.34
LMBR1-219ENST00000498034 MYO9BQ13459 2157 aa23.4■■□□□ 1.34
LMBR1-219ENST00000498034 UNC80Q8N2C7 3258 aa23.39■■□□□ 1.34
LMBR1-219ENST00000498034 CDC45O75419 566 aa23.39■■□□□ 1.33
LMBR1-219ENST00000498034 BAIAP3O94812 1187 aa23.39■■□□□ 1.33
LMBR1-219ENST00000498034 CA3P07451 260 aa23.39■■□□□ 1.33
LMBR1-219ENST00000498034 EXOSC10Q01780 885 aaKnown RBP23.39■■□□□ 1.33
LMBR1-219ENST00000498034 ADCK5Q3MIX3 580 aa23.39■■□□□ 1.33
LMBR1-219ENST00000498034 ZNF618Q5T7W0 954 aa23.39■■□□□ 1.33
LMBR1-219ENST00000498034 TRAF7Q6Q0C0 670 aa23.39■■□□□ 1.33
LMBR1-219ENST00000498034 METTL7BQ6UX53 244 aa23.39■■□□□ 1.33
LMBR1-219ENST00000498034 SYNE3Q6ZMZ3 975 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms