RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	PLIN4	Q96Q06	1357 aa		6.65	□□□□□ -1.35
UBE3C-208	ENST00000497368	PTPRS	Q13332	1948 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	CHD7	Q9P2D1	2997 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	GSG1L2	A8MUP6	293 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	COBL	O75128	1261 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	CYBA	P13498	195 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	CDK8	P49336	464 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	SPEM2	Q0P670	501 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	TTF1	Q15361	905 aa	Predicted RBP	6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	OCLN	Q16625	522 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	LRRC26	Q2I0M4	334 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	CTR9	Q6PD62	1173 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	PLEKHH3	Q7Z736	793 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	CERS3	Q8IU89	383 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	GPRC5A	Q8NFJ5	357 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	SOCS4	Q8WXH5	440 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	ATG4C	Q96DT6	458 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	FGD4	Q96M96	766 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	STRBP	Q96SI9	672 aa	Known RBP	6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	SEC62	Q99442	399 aa	Known RBP	6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	MOV10L1	Q9BXT6	1211 aa	Known RBP	6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	CRNKL1	Q9BZJ0	848 aa	Known RBP	6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	DCTPP1	Q9H773	170 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	AVEN	Q9NQS1	362 aa	Predicted RBP	6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	TMOD4	Q9NZQ9	345 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	ZNF214	Q9UL59	606 aa	Predicted RBP	6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	ADAMTS5	Q9UNA0	930 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	TMX2	Q9Y320	296 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	RABGAP1	Q9Y3P9	1069 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	RPTOR	Q8N122	1335 aa		6.64	□□□□□ -1.35
UBE3C-208	ENST00000497368	TGFBR3L	H3BV60	316 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	ADCY6	O43306	1168 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	IFIT2	P09913	472 aa	Known RBP	6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	ZKSCAN1	P17029	563 aa	Predicted RBP	6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	HOXB4	P17483	251 aa	Predicted RBP	6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	MAPK4	P31152	587 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	TMEM132B	Q14DG7	1078 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	HIF1A	Q16665	826 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	HSP90AB4P	Q58FF6	505 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	TMEM179	Q6ZVK1	233 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	TTC6	Q86TZ1	520 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	C7orf61	Q8IZ16	206 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	SPICE1	Q8N0Z3	855 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	TMEM151A	Q8N4L1	468 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	KBTBD3	Q8NAB2	608 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	GCC1	Q96CN9	775 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	BTBD6	Q96KE9	485 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	FEZ1	Q99689	392 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	MKNK1	Q9BUB5	465 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	LRRCC1	Q9C099	1032 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	TANC1	Q9C0D5	1861 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	VCPKMT	Q9H867	229 aa		6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	BIN2	Q9UBW5	565 aa	Predicted RBP	6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	DMGDH	Q9UI17	866 aa	Known RBP	6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	6.63	□□□□□ -1.35
UBE3C-208	ENST00000497368	ASTN1	O14525	1302 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	SLC15A5	A6NIM6	579 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	GPAA1	O43292	621 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	HMMR	O75330	724 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	POLR3D	P05423	398 aa	Predicted RBP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	EEF2	P13639	858 aa	Known RBP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	TAL1	P17542	331 aa	Predicted RBP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	SYN1	P17600	705 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	ADORA2A	P29274	412 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	CYP2C19	P33261	490 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	RGS2	P41220	211 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	USP14	P54578	494 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	RRP1	P56182	461 aa	Known RBP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	ICA1	Q05084	483 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	SBK1	Q52WX2	424 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	IER5	Q5VY09	327 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	CAPN12	Q6ZSI9	719 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	CHSY3	Q70JA7	882 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	BEND7	Q8N7W2	519 aa	Predicted RBP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	LENG1	Q96BZ8	264 aa	Predicted RBP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	NUP88	Q99567	741 aa	Predicted RBP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	SPATC1L	Q9H0A9	340 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	ATP8A2	Q9NTI2	1148 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	ECHDC1	Q9NTX5	307 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	STAP2	Q9UGK3	403 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	SWAP70	Q9UH65	585 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	LRFN2	Q9ULH4	789 aa		6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
UBE3C-208	ENST00000497368	MUC3A	Q02505	3323 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	MYH6	P13533	1939 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	WDR46	O15213	610 aa	Known RBP	6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	TFRC	P02786	760 aa	Known RBP	6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	ERCC3	P19447	782 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	GRN	P28799	593 aa	Known RBP	6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	MAGEA10	P43363	369 aa	Predicted RBP	6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	IDH3A	P50213	366 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	SNX17	Q15036	470 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	FAM83B	Q5T0W9	1011 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	VPS53	Q5VIR6	699 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	KANK3	Q6NY19	840 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	CCDC129	Q6ZRS4	1044 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	NECAB2	Q7Z6G3	386 aa		6.61	□□□□□ -1.35
UBE3C-208	ENST00000497368	KCTD17	Q8N5Z5	321 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms