RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 TROAPQ12815 778 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 CCDC85BQ15834 202 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-208ENST00000496375 TMEM67Q5HYA8 995 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 TJAP1Q5JTD0 557 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 CATIPQ7Z7H3 387 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 VSIG10LQ86VR7 867 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 FCHSD1Q86WN1 690 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 MB21D2Q8IYB1 491 aaPredicted RBP16.64■□□□□ 0.25
CXCL12-208ENST00000496375 C7orf31Q8N865 590 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 AFAP1L1Q8TED9 768 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 DHX38Q92620 1227 aaKnown RBP16.64■□□□□ 0.25
CXCL12-208ENST00000496375 TRANK1O15050 2925 aa16.64■□□□□ 0.25
CXCL12-208ENST00000496375 PNMA6FA0A0J9YX94 578 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 HAS3O00219 553 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 GGPS1O95749 300 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 F2P00734 622 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 ANTXR2P58335 489 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 MFSD10Q14728 455 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 KIAA0753Q2KHM9 967 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 MYSM1Q5VVJ2 828 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 KCNV1Q6PIU1 500 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 PHOSPHO2Q8TCD6 241 aa16.63■□□□□ 0.25
CXCL12-208ENST00000496375 ZFP91Q96JP5 570 aaPredicted RBP16.63■□□□□ 0.25
CXCL12-208ENST00000496375 TTC28Q96AY4 2481 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 BAIAP3O94812 1187 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 SELPP16109 830 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 UBA1P22314 1058 aaKnown RBP16.62■□□□□ 0.25
CXCL12-208ENST00000496375 CCND2P30279 289 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 HSPA4P34932 840 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 RBL2Q08999 1139 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 GPNMBQ14956 572 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 HSDL1Q3SXM5 330 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 CELF3Q5SZQ8 465 aaKnown RBP16.62■□□□□ 0.25
CXCL12-208ENST00000496375 LRRC8DQ7L1W4 858 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 HERC6Q8IVU3 1022 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
CXCL12-208ENST00000496375 SPATA33Q96N06 139 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 THEGQ9P2T0 379 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 MUC3AQ02505 3323 aa16.62■□□□□ 0.25
CXCL12-208ENST00000496375 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
CXCL12-208ENST00000496375 TGFB3P10600 412 aa16.61■□□□□ 0.25
CXCL12-208ENST00000496375 CKBP12277 381 aa16.61■□□□□ 0.25
CXCL12-208ENST00000496375 HOXD8P13378 290 aaPredicted RBP16.61■□□□□ 0.25
CXCL12-208ENST00000496375 KCNJ6P48051 423 aa16.61■□□□□ 0.25
CXCL12-208ENST00000496375 SP2Q02086 613 aa16.61■□□□□ 0.25
CXCL12-208ENST00000496375 IGDCC4Q8TDY8 1250 aa16.61■□□□□ 0.25
CXCL12-208ENST00000496375 ATXN2LQ8WWM7 1075 aaKnown RBP16.61■□□□□ 0.25
CXCL12-208ENST00000496375 CERS4Q9HA82 394 aa16.61■□□□□ 0.25
CXCL12-208ENST00000496375 PTPRSQ13332 1948 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 KIF28PB7ZC32 967 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 EIF5BO60841 1220 aaKnown RBP16.6■□□□□ 0.25
CXCL12-208ENST00000496375 PARNO95453 639 aaKnown RBP16.6■□□□□ 0.25
CXCL12-208ENST00000496375 ZNF200P98182 395 aaPredicted RBP16.6■□□□□ 0.25
CXCL12-208ENST00000496375 PTK7Q13308 1070 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 KRT32Q14532 448 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 MICALL1Q8N3F8 863 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
CXCL12-208ENST00000496375 USP26Q9BXU7 913 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 MLXIPQ9HAP2 919 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 XIRP2A4UGR9 3374 aa16.6■□□□□ 0.25
CXCL12-208ENST00000496375 RFXAPO00287 272 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 NBNO60934 754 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 ARHGEF15O94989 841 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 CXCL10P02778 98 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 WDR5P61964 334 aaKnown RBP16.59■□□□□ 0.25
CXCL12-208ENST00000496375 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
CXCL12-208ENST00000496375 CNKSR3Q6P9H4 555 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 ZNF654Q8IZM8 581 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 WNT8BQ93098 351 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 MYL10Q9BUA6 226 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 SPZ1Q9BXG8 430 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 FRMPD4Q14CM0 1322 aa16.59■□□□□ 0.25
CXCL12-208ENST00000496375 EPOPA6NHQ4 379 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 PRC1O43663 620 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 TLL1O43897 1013 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 DDAH1O94760 285 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 KIF5BP33176 963 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 MCM5P33992 734 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 MRPS9P82933 396 aaKnown RBP16.58■□□□□ 0.24
CXCL12-208ENST00000496375 TAP1Q03518 808 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 HIC1Q14526 733 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 GNPTABQ3T906 1256 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 ZNF618Q5T7W0 954 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 ARNTL2Q8WYA1 636 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 RRP36Q96EU6 259 aaKnown RBP16.58■□□□□ 0.24
CXCL12-208ENST00000496375 ASB2Q96Q27 587 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 C16orf70Q9BSU1 422 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 BCAS3Q9H6U6 928 aa16.58■□□□□ 0.24
CXCL12-208ENST00000496375 PRRC2BQ5JSZ5 2229 aaKnown RBP16.57■□□□□ 0.24
CXCL12-208ENST00000496375 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 DEFB103AP81534 67 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 MRPS5P82675 430 aaKnown RBP16.57■□□□□ 0.24
CXCL12-208ENST00000496375 COL9A3Q14050 684 aaPredicted RBP16.57■□□□□ 0.24
CXCL12-208ENST00000496375 TCTN1Q2MV58 587 aa16.57■□□□□ 0.24
CXCL12-208ENST00000496375 TRAF7Q6Q0C0 670 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms