RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 MEIS1O00470 390 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 MAFGO15525 162 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 DYNC1LI2O43237 492 aaPredicted RBP16.76■□□□□ 0.27
HDAC9-226ENST00000496026 SGPL1O95470 568 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
HDAC9-226ENST00000496026 SETQ01105 290 aaPredicted RBP16.76■□□□□ 0.27
HDAC9-226ENST00000496026 PRR16Q569H4 304 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 TMEM63BQ5T3F8 832 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 GJC2Q5T442 439 aaPredicted RBP16.76■□□□□ 0.27
HDAC9-226ENST00000496026 TLK2Q86UE8 772 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 OR6J1Q8NGC5 347 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
HDAC9-226ENST00000496026 SPC25Q9HBM1 224 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 PKD2L1Q9P0L9 805 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 DDX41Q9UJV9 622 aaKnown RBP16.76■□□□□ 0.27
HDAC9-226ENST00000496026 NOL7Q9UMY1 257 aaKnown RBP16.76■□□□□ 0.27
HDAC9-226ENST00000496026 GNEQ9Y223 722 aaKnown RBP16.76■□□□□ 0.27
HDAC9-226ENST00000496026 Q9Y3F1 56 aa16.76■□□□□ 0.27
HDAC9-226ENST00000496026 STX6O43752 255 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 CCNT1O60563 726 aaKnown RBP16.75■□□□□ 0.27
HDAC9-226ENST00000496026 TDP2O95551 362 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 PGK1P00558 417 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 GH1P01241 217 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 GCFC2P16383 781 aaKnown RBP16.75■□□□□ 0.27
HDAC9-226ENST00000496026 ATP2B1P20020 1258 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 GJA8P48165 433 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 SEMA3FQ13275 785 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 MOXD1Q6UVY6 613 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 DHX37Q8IY37 1157 aaKnown RBP16.75■□□□□ 0.27
HDAC9-226ENST00000496026 COPS5Q92905 334 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 KCNH7Q9NS40 1196 aa16.75■□□□□ 0.27
HDAC9-226ENST00000496026 HTTP42858 3142 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 SYNRGQ9UMZ2 1314 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 IGLV3-22A0A075B6J6 115 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 CYP3A7-CYP3A51PA0A087WV96 503 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 EDIL3O43854 480 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 SORBS3O60504 671 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 GGPS1O95749 300 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 ARP10275 920 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 PDIA4P13667 645 aaKnown RBP16.74■□□□□ 0.27
HDAC9-226ENST00000496026 UBA1P22314 1058 aaKnown RBP16.74■□□□□ 0.27
HDAC9-226ENST00000496026 PTGS1P23219 599 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 CYP3A7P24462 503 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 NEDD9Q14511 834 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 PPP4R3AQ6IN85 833 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 FERMT3Q86UX7 667 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 GIMAP8Q8ND71 665 aaPredicted RBP16.74■□□□□ 0.27
HDAC9-226ENST00000496026 ZNF577Q9BSK1 485 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 AGO4Q9HCK5 861 aaKnown RBP16.74■□□□□ 0.27
HDAC9-226ENST00000496026 TSHZ2Q9NRE2 1034 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 DDX25Q9UHL0 483 aaKnown RBP16.74■□□□□ 0.27
HDAC9-226ENST00000496026 MCM3APO60318 1980 aa16.74■□□□□ 0.27
HDAC9-226ENST00000496026 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 C6orf222P0C671 652 aaPredicted RBP16.73■□□□□ 0.27
HDAC9-226ENST00000496026 GJA9P57773 515 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 SP2Q02086 613 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 LAMC2Q13753 1193 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 Q4G0T1 1027 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 CELF3Q5SZQ8 465 aaKnown RBP16.73■□□□□ 0.27
HDAC9-226ENST00000496026 RNF180Q86T96 592 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 UIMC1Q96RL1 719 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 SENP7Q9BQF6 1050 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 SDF4Q9BRK5 362 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 CRISPLD2Q9H0B8 497 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 UPF3AQ9H1J1 476 aaKnown RBP16.73■□□□□ 0.27
HDAC9-226ENST00000496026 OGDHLQ9ULD0 1010 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 MTMR6Q9Y217 621 aa16.73■□□□□ 0.27
HDAC9-226ENST00000496026 IPO5O00410 1097 aaKnown RBP16.72■□□□□ 0.27
HDAC9-226ENST00000496026 MARCH6O60337 910 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 ATP9AO75110 1047 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 KCNA2P16389 499 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 CAPN2P17655 700 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 TRAPPC10P48553 1259 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 CPT1AP50416 773 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 ARHGAP1Q07960 439 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 BRDTQ58F21 947 aaPredicted RBP16.72■□□□□ 0.27
HDAC9-226ENST00000496026 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 CYFIP1Q7L576 1253 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 BRAPQ7Z569 592 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 LENG9Q96B70 501 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 SPATA33Q96N06 139 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 MBOAT7Q96N66 472 aa16.72■□□□□ 0.27
HDAC9-226ENST00000496026 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
HDAC9-226ENST00000496026 KBTBD13C9JR72 458 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 SLC37A4O43826 429 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 ZEB2O60315 1214 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 ADAMTS4O75173 837 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 EN2P19622 333 aaPredicted RBP16.71■□□□□ 0.27
HDAC9-226ENST00000496026 MCM7P33993 719 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 SOX10P56693 466 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 BEX3Q00994 111 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 SP4Q02446 784 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 LRRC41Q15345 812 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 FSCN1Q16658 493 aaKnown RBP16.71■□□□□ 0.27
HDAC9-226ENST00000496026 GNASQ5JWF2 1037 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
HDAC9-226ENST00000496026 MYSM1Q5VVJ2 828 aa16.71■□□□□ 0.27
HDAC9-226ENST00000496026 METTL7BQ6UX53 244 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms