RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 MCTP1Q6DN14 999 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 MOXD1Q6UVY6 613 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 NEK8Q86SG6 692 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 TLK2Q86UE8 772 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 TNFRSF25Q93038 417 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 SENP7Q9BQF6 1050 aa19.45■□□□□ 0.7
HDAC6-235ENST00000495515 MEIS1O00470 390 aa19.44■□□□□ 0.7
HDAC6-235ENST00000495515 DYNC1LI2O43237 492 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-235ENST00000495515 GCFC2P16383 781 aaKnown RBP19.44■□□□□ 0.7
HDAC6-235ENST00000495515 GJA9P57773 515 aa19.44■□□□□ 0.7
HDAC6-235ENST00000495515 LY6KQ17RY6 165 aa19.44■□□□□ 0.7
HDAC6-235ENST00000495515 PLA2G4DQ86XP0 818 aa19.44■□□□□ 0.7
HDAC6-235ENST00000495515 NOSTRINQ8IVI9 506 aa19.44■□□□□ 0.7
HDAC6-235ENST00000495515 ANKLE1Q8NAG6 615 aa19.44■□□□□ 0.7
HDAC6-235ENST00000495515 OR6J1Q8NGC5 347 aa19.44■□□□□ 0.7
HDAC6-235ENST00000495515 PDE4DIPQ5VU43 2346 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 FAM86B1E9PN63 330 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 ADCY6O43306 1168 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 ZEB2O60315 1214 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 ARIH2O95376 493 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 PGK1P00558 417 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 MYCNP04198 464 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-235ENST00000495515 FAM86B2P0C5J1 330 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 C6orf222P0C671 652 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-235ENST00000495515 LAMC2Q13753 1193 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 LETM2Q2VYF4 491 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 PRR16Q569H4 304 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 DHX37Q8IY37 1157 aaKnown RBP19.43■□□□□ 0.7
HDAC6-235ENST00000495515 LENG1Q96BZ8 264 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-235ENST00000495515 UPF3AQ9H1J1 476 aaKnown RBP19.43■□□□□ 0.7
HDAC6-235ENST00000495515 MLXIPQ9HAP2 919 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 KCNH7Q9NS40 1196 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 NOL7Q9UMY1 257 aaKnown RBP19.43■□□□□ 0.7
HDAC6-235ENST00000495515 SYNRGQ9UMZ2 1314 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 MCM3APO60318 1980 aa19.43■□□□□ 0.7
HDAC6-235ENST00000495515 HTTP42858 3142 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 CYP3A7-CYP3A51PA0A087WV96 503 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 POTEFA5A3E0 1075 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 VPS37CA5D8V6 355 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-235ENST00000495515 KBTBD13C9JR72 458 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 GGPS1O95749 300 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 UBA1P22314 1058 aaKnown RBP19.42■□□□□ 0.7
HDAC6-235ENST00000495515 CYP3A7P24462 503 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 U2AF2P26368 475 aaKnown RBP eCLIP19.42■□□□□ 0.7
HDAC6-235ENST00000495515 ANP32AP39687 249 aaKnown RBP19.42■□□□□ 0.7
HDAC6-235ENST00000495515 CPT1AP50416 773 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 PPP4R3AQ6IN85 833 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 PCSK9Q8NBP7 692 aaKnown RBP19.42■□□□□ 0.7
HDAC6-235ENST00000495515 CYP2W1Q8TAV3 490 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 EMID1Q96A84 441 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-235ENST00000495515 LRRC37A2A6NM11 1700 aa19.42■□□□□ 0.7
HDAC6-235ENST00000495515 IGLV3-22A0A075B6J6 115 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 DNM1LO00429 736 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 CCNT1O60563 726 aaKnown RBP19.41■□□□□ 0.7
HDAC6-235ENST00000495515 ADAMTS4O75173 837 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 SYT1P21579 422 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 CST5P28325 142 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-235ENST00000495515 TRAPPC10P48553 1259 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 NKX3-2P78367 333 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 SEMA3FQ13275 785 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 LRRC41Q15345 812 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 FSCN1Q16658 493 aaKnown RBP19.41■□□□□ 0.7
HDAC6-235ENST00000495515 Q4G0T1 1027 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 EARS2Q5JPH6 523 aaKnown RBP19.41■□□□□ 0.7
HDAC6-235ENST00000495515 GNASQ5JWF2 1037 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 CELF3Q5SZQ8 465 aaKnown RBP19.41■□□□□ 0.7
HDAC6-235ENST00000495515 GJC2Q5T442 439 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-235ENST00000495515 SDF4Q9BRK5 362 aa19.41■□□□□ 0.7
HDAC6-235ENST00000495515 TSEN34Q9BSV6 310 aaKnown RBP19.41■□□□□ 0.7
HDAC6-235ENST00000495515 DDX25Q9UHL0 483 aaKnown RBP19.41■□□□□ 0.7
HDAC6-235ENST00000495515 ARP10275 920 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 EN2P19622 333 aaPredicted RBP19.4■□□□□ 0.7
HDAC6-235ENST00000495515 SP2Q02086 613 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 ARHGAP1Q07960 439 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 TMEM63BQ5T3F8 832 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 MYSM1Q5VVJ2 828 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 METTL7BQ6UX53 244 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 SPRYD3Q8NCJ5 442 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 KLHDC9Q8NEP7 349 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 COPS5Q92905 334 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 ZNF577Q9BSK1 485 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 AGO4Q9HCK5 861 aaKnown RBP19.4■□□□□ 0.7
HDAC6-235ENST00000495515 DAXXQ9UER7 740 aaPredicted RBP19.4■□□□□ 0.7
HDAC6-235ENST00000495515 TCEAL9Q9UHQ7 104 aa19.4■□□□□ 0.7
HDAC6-235ENST00000495515 FAM205CA6NFA0 338 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 MOXD2PA6NHM9 499 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 KIF28PB7ZC32 967 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 NOP56O00567 594 aaKnown RBP19.39■□□□□ 0.69
HDAC6-235ENST00000495515 STX6O43752 255 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 KPNA6O60684 536 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 TDP2O95551 362 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 KCNA2P16389 499 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 CYFIP1Q7L576 1253 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 PPTC7Q8NI37 304 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 SPATA33Q96N06 139 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 MBOAT7Q96N66 472 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 TBC1D22BQ9NU19 505 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 PKD2L1Q9P0L9 805 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 NFASCO94856 1347 aa19.39■□□□□ 0.69
HDAC6-235ENST00000495515 A6NJR5 290 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms