RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 CERS4Q9HA82 394 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 SENP2Q9HC62 589 aa25.62■■□□□ 1.69
HDDC3-203ENST00000494993 TNFRSF10AO00220 468 aa25.61■■□□□ 1.69
HDDC3-203ENST00000494993 RFXAPO00287 272 aa25.61■■□□□ 1.69
HDDC3-203ENST00000494993 CKBP12277 381 aa25.61■■□□□ 1.69
HDDC3-203ENST00000494993 WTAPQ15007 396 aa25.61■■□□□ 1.69
HDDC3-203ENST00000494993 RALYLQ86SE5 291 aaKnown RBP25.61■■□□□ 1.69
HDDC3-203ENST00000494993 SUPT16HQ9Y5B9 1047 aaKnown RBP25.61■■□□□ 1.69
HDDC3-203ENST00000494993 MICAL3Q7RTP6 2002 aa25.61■■□□□ 1.69
HDDC3-203ENST00000494993 E7EWF7 191 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 GCOM1H8Y6P7 765 aaPredicted RBP25.6■■□□□ 1.69
HDDC3-203ENST00000494993 CYTH3O43739 400 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 ARHGEF15O94989 841 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 GGPS1O95749 300 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 CXCL10P02778 98 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 POLR2MP0CAP2 368 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 POU3F3P20264 500 aaPredicted RBP25.6■■□□□ 1.69
HDDC3-203ENST00000494993 WDR5P61964 334 aaKnown RBP25.6■■□□□ 1.69
HDDC3-203ENST00000494993 TAP1Q03518 808 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 TROAPQ12815 778 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 PTK7Q13308 1070 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 HSDL1Q3SXM5 330 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 CELF3Q5SZQ8 465 aaKnown RBP25.6■■□□□ 1.69
HDDC3-203ENST00000494993 CNKSR3Q6P9H4 555 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 NCOA7Q8NI08 942 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 TSPYL2Q9H2G4 693 aaPredicted RBP25.6■■□□□ 1.69
HDDC3-203ENST00000494993 TAF6LQ9Y6J9 622 aa25.6■■□□□ 1.69
HDDC3-203ENST00000494993 EPOPA6NHQ4 379 aa25.59■■□□□ 1.69
HDDC3-203ENST00000494993 NBNO60934 754 aa25.59■■□□□ 1.69
HDDC3-203ENST00000494993 PPFIA4O75335 1185 aa25.59■■□□□ 1.69
HDDC3-203ENST00000494993 UBA1P22314 1058 aaKnown RBP25.59■■□□□ 1.69
HDDC3-203ENST00000494993 CCND2P30279 289 aa25.59■■□□□ 1.69
HDDC3-203ENST00000494993 SART3Q15020 963 aaKnown RBP25.59■■□□□ 1.69
HDDC3-203ENST00000494993 SPATA33Q96N06 139 aa25.59■■□□□ 1.69
HDDC3-203ENST00000494993 MTCH2Q9Y6C9 303 aa25.59■■□□□ 1.69
HDDC3-203ENST00000494993 KAT6AQ92794 2004 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 PNMA6FA0A0J9YX94 578 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 GTPBP6O43824 516 aaPredicted RBP25.58■■□□□ 1.69
HDDC3-203ENST00000494993 TLL1O43897 1013 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 SORBS3O60504 671 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 TGFB3P10600 412 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 SP2Q02086 613 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 TRIM71Q2Q1W2 868 aaKnown RBP25.58■■□□□ 1.69
HDDC3-203ENST00000494993 FCHSD1Q86WN1 690 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 ADAMTS19Q8TE59 1207 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 ARNTL2Q8WYA1 636 aa25.58■■□□□ 1.69
HDDC3-203ENST00000494993 SIP14410 1827 aa25.58■■□□□ 1.68
HDDC3-203ENST00000494993 SGSM2O43147 1006 aa25.57■■□□□ 1.68
HDDC3-203ENST00000494993 ZNF200P98182 395 aaPredicted RBP25.57■■□□□ 1.68
HDDC3-203ENST00000494993 GPKOWQ92917 476 aaPredicted RBP eCLIP25.57■■□□□ 1.68
HDDC3-203ENST00000494993 WNT8BQ93098 351 aa25.57■■□□□ 1.68
HDDC3-203ENST00000494993 ZFP91Q96JP5 570 aaPredicted RBP25.57■■□□□ 1.68
HDDC3-203ENST00000494993 DEFB103AP81534 67 aa25.56■■□□□ 1.68
HDDC3-203ENST00000494993 TCTN1Q2MV58 587 aa25.56■■□□□ 1.68
HDDC3-203ENST00000494993 TRAF7Q6Q0C0 670 aa25.56■■□□□ 1.68
HDDC3-203ENST00000494993 CATIPQ7Z7H3 387 aa25.56■■□□□ 1.68
HDDC3-203ENST00000494993 IL27Q8NEV9 243 aa25.56■■□□□ 1.68
HDDC3-203ENST00000494993 FRMPD4Q14CM0 1322 aa25.56■■□□□ 1.68
HDDC3-203ENST00000494993 ANTXR2P58335 489 aa25.55■■□□□ 1.68
HDDC3-203ENST00000494993 HIC1Q14526 733 aa25.55■■□□□ 1.68
HDDC3-203ENST00000494993 ZNF618Q5T7W0 954 aa25.55■■□□□ 1.68
HDDC3-203ENST00000494993 TMCO2Q7Z6W1 182 aaPredicted RBP25.55■■□□□ 1.68
HDDC3-203ENST00000494993 C16orf70Q9BSU1 422 aa25.55■■□□□ 1.68
HDDC3-203ENST00000494993 MLXIPQ9HAP2 919 aa25.55■■□□□ 1.68
HDDC3-203ENST00000494993 ABHD14A-ACY1A0A1B0GW23 586 aa25.54■■□□□ 1.68
HDDC3-203ENST00000494993 SKIV2LQ15477 1246 aaKnown RBP25.54■■□□□ 1.68
HDDC3-203ENST00000494993 MB21D2Q8IYB1 491 aaPredicted RBP25.54■■□□□ 1.68
HDDC3-203ENST00000494993 IGDCC4Q8TDY8 1250 aa25.54■■□□□ 1.68
HDDC3-203ENST00000494993 MAP4K1Q92918 833 aa25.54■■□□□ 1.68
HDDC3-203ENST00000494993 UHRF1Q96T88 793 aaPredicted RBP25.54■■□□□ 1.68
HDDC3-203ENST00000494993 ZBED2Q9BTP6 218 aa25.54■■□□□ 1.68
HDDC3-203ENST00000494993 XIRP2A4UGR9 3374 aa25.54■■□□□ 1.68
HDDC3-203ENST00000494993 LCHNA4D1U4 455 aa25.53■■□□□ 1.68
HDDC3-203ENST00000494993 EFCAB14O75071 495 aa25.53■■□□□ 1.68
HDDC3-203ENST00000494993 MBTPS1Q14703 1052 aa25.53■■□□□ 1.68
HDDC3-203ENST00000494993 GNPTABQ3T906 1256 aa25.53■■□□□ 1.68
HDDC3-203ENST00000494993 KRT40Q6A162 431 aa25.53■■□□□ 1.68
HDDC3-203ENST00000494993 SPRED2Q7Z698 418 aa25.53■■□□□ 1.68
HDDC3-203ENST00000494993 PIBF1Q8WXW3 757 aa25.53■■□□□ 1.68
HDDC3-203ENST00000494993 STAM2O75886 525 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 ICAM3P32942 547 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 MRPS9P82933 396 aaKnown RBP25.52■■□□□ 1.68
HDDC3-203ENST00000494993 TFF2Q03403 129 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 GRB10Q13322 594 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 IKBKEQ14164 716 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 SERINC5Q86VE9 423 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 INPP4AQ96PE3 977 aaPredicted RBP25.52■■□□□ 1.68
HDDC3-203ENST00000494993 MAP3K14Q99558 947 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 BCAS3Q9H6U6 928 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 RBM8AQ9Y5S9 174 aaKnown RBP25.52■■□□□ 1.68
HDDC3-203ENST00000494993 BDP1A6H8Y1 2624 aa25.52■■□□□ 1.68
HDDC3-203ENST00000494993 BRWD1Q9NSI6 2320 aa25.51■■□□□ 1.67
HDDC3-203ENST00000494993 H3BRB1 525 aa25.51■■□□□ 1.67
HDDC3-203ENST00000494993 GJB5O95377 273 aa25.51■■□□□ 1.67
HDDC3-203ENST00000494993 LGALS2P05162 132 aa25.51■■□□□ 1.67
HDDC3-203ENST00000494993 AAK1Q2M2I8 961 aa25.51■■□□□ 1.67
HDDC3-203ENST00000494993 SPZ1Q9BXG8 430 aa25.51■■□□□ 1.67
HDDC3-203ENST00000494993 TUT1Q9H6E5 874 aaKnown RBP25.51■■□□□ 1.67
HDDC3-203ENST00000494993 LY9Q9HBG7 655 aa25.51■■□□□ 1.67
HDDC3-203ENST00000494993 C17orf102A2RUQ5 167 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms