RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 KRT40Q6A162 431 aa17.02■□□□□ 0.32
PCCB-219ENST00000494742 MTMR8Q96EF0 704 aa17.02■□□□□ 0.32
PCCB-219ENST00000494742 PDCD2LQ9BRP1 358 aa17.02■□□□□ 0.32
PCCB-219ENST00000494742 ALG1Q9BT22 464 aa17.02■□□□□ 0.32
PCCB-219ENST00000494742 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.32
PCCB-219ENST00000494742 SIP14410 1827 aa17.01■□□□□ 0.31
PCCB-219ENST00000494742 LCHNA4D1U4 455 aa17.01■□□□□ 0.31
PCCB-219ENST00000494742 KLRF2D3W0D1 207 aa17.01■□□□□ 0.31
PCCB-219ENST00000494742 OPLAHO14841 1288 aa17.01■□□□□ 0.31
PCCB-219ENST00000494742 ZBTB5O15062 677 aa17.01■□□□□ 0.31
PCCB-219ENST00000494742 ERVK-21P61565 698 aa17.01■□□□□ 0.31
PCCB-219ENST00000494742 NUCB1Q02818 461 aa17.01■□□□□ 0.31
PCCB-219ENST00000494742 TRIM71Q2Q1W2 868 aaKnown RBP17.01■□□□□ 0.31
PCCB-219ENST00000494742 IFIT1BQ5T764 474 aaKnown RBP17.01■□□□□ 0.31
PCCB-219ENST00000494742 VSIG10LQ86VR7 867 aa17.01■□□□□ 0.31
PCCB-219ENST00000494742 TGS1Q96RS0 853 aaKnown RBP17.01■□□□□ 0.31
PCCB-219ENST00000494742 ARIH1Q9Y4X5 557 aaPredicted RBP17.01■□□□□ 0.31
PCCB-219ENST00000494742 ZNF286BP0CG31 522 aa17■□□□□ 0.31
PCCB-219ENST00000494742 CELF3Q5SZQ8 465 aaKnown RBP17■□□□□ 0.31
PCCB-219ENST00000494742 ZNF618Q5T7W0 954 aa17■□□□□ 0.31
PCCB-219ENST00000494742 B4GALNT3Q6L9W6 998 aa17■□□□□ 0.31
PCCB-219ENST00000494742 TRAF7Q6Q0C0 670 aa17■□□□□ 0.31
PCCB-219ENST00000494742 SUGCTQ9HAC7 445 aa17■□□□□ 0.31
PCCB-219ENST00000494742 LINC01553A4QN01 128 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 LGR5O75473 907 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 RGS20O76081 388 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 PLA2G5P39877 138 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 PGM5Q15124 567 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 SEC23AQ15436 765 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 HSDL1Q3SXM5 330 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 SPRED2Q7Z698 418 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 SERINC5Q86VE9 423 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 STAG2Q8N3U4 1231 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 SPATA33Q96N06 139 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 INSL6Q9Y581 213 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 PCDHA1Q9Y5I3 950 aa16.99■□□□□ 0.31
PCCB-219ENST00000494742 PALM3A6NDB9 673 aaPredicted RBP16.98■□□□□ 0.31
PCCB-219ENST00000494742 GGPS1O95749 300 aa16.98■□□□□ 0.31
PCCB-219ENST00000494742 MYCLP12524 364 aaPredicted RBP16.98■□□□□ 0.31
PCCB-219ENST00000494742 MBTPS1Q14703 1052 aa16.98■□□□□ 0.31
PCCB-219ENST00000494742 TCTN1Q2MV58 587 aa16.98■□□□□ 0.31
PCCB-219ENST00000494742 TMCO2Q7Z6W1 182 aaPredicted RBP16.98■□□□□ 0.31
PCCB-219ENST00000494742 GDPD5Q8WTR4 605 aa16.98■□□□□ 0.31
PCCB-219ENST00000494742 C16orf70Q9BSU1 422 aa16.98■□□□□ 0.31
PCCB-219ENST00000494742 RAPGEFL1Q9UHV5 662 aa16.98■□□□□ 0.31
PCCB-219ENST00000494742 MAD2L2Q9UI95 211 aa16.98■□□□□ 0.31
PCCB-219ENST00000494742 RSPH10B2B2RC85 870 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 PPP1R11O60927 126 aaPredicted RBP16.97■□□□□ 0.31
PCCB-219ENST00000494742 CAND2O75155 1236 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 STAM2O75886 525 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 AMHP03971 560 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 RSPH10BP0C881 870 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 CCND2P30279 289 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 HOXC8P31273 242 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 MKRN4PQ13434 485 aaPredicted RBP16.97■□□□□ 0.31
PCCB-219ENST00000494742 WNT8BQ93098 351 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 FAM122AQ96E09 287 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 RIOX1Q9H6W3 641 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 MLXIPQ9HAP2 919 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 MICAL3Q7RTP6 2002 aa16.97■□□□□ 0.31
PCCB-219ENST00000494742 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.96■□□□□ 0.31
PCCB-219ENST00000494742 H3BRB1 525 aa16.96■□□□□ 0.31
PCCB-219ENST00000494742 GCOM1H8Y6P7 765 aaPredicted RBP16.96■□□□□ 0.31
PCCB-219ENST00000494742 POLR2MP0CAP2 368 aa16.96■□□□□ 0.31
PCCB-219ENST00000494742 UBA1P22314 1058 aaKnown RBP16.96■□□□□ 0.31
PCCB-219ENST00000494742 HOXA13P31271 388 aaPredicted RBP16.96■□□□□ 0.31
PCCB-219ENST00000494742 HTRA4P83105 476 aaPredicted RBP16.96■□□□□ 0.31
PCCB-219ENST00000494742 ZNF200P98182 395 aaPredicted RBP16.96■□□□□ 0.31
PCCB-219ENST00000494742 SP2Q02086 613 aa16.96■□□□□ 0.31
PCCB-219ENST00000494742 TRDNQ13061 729 aa16.96■□□□□ 0.31
PCCB-219ENST00000494742 PLEKHG4Q58EX7 1191 aa16.96■□□□□ 0.31
PCCB-219ENST00000494742 SP7Q8TDD2 431 aaPredicted RBP16.96■□□□□ 0.31
PCCB-219ENST00000494742 SAMD11Q96NU1 681 aa16.96■□□□□ 0.31
PCCB-219ENST00000494742 TUT1Q9H6E5 874 aaKnown RBP16.96■□□□□ 0.31
PCCB-219ENST00000494742 COL4A6Q14031 1691 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 C17orf102A2RUQ5 167 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 IGHDP01880 384 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 THPOP40225 353 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 HIC1Q14526 733 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 GRM4Q14833 912 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 GNPTABQ3T906 1256 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 DBF4BQ8NFT6 615 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 ATP6V0A1Q93050 837 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 USP26Q9BXU7 913 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 EPHX3Q9H6B9 360 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 UBE2ZQ9H832 354 aaPredicted RBP16.95■□□□□ 0.3
PCCB-219ENST00000494742 MTUS1Q9ULD2 1270 aa16.95■□□□□ 0.3
PCCB-219ENST00000494742 PNMA6FA0A0J9YX94 578 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 GPR37L1O60883 481 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 GNAT1P11488 350 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 ICAM3P32942 547 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 LEXMQ3ZCV2 418 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 TMEM31Q5JXX7 168 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCCB-219ENST00000494742 CYB5R4Q7L1T6 521 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 FBXO22Q8NEZ5 403 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 IL31RAQ8NI17 732 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 SEPT8Q92599 483 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 LRFN3Q9BTN0 628 aa16.94■□□□□ 0.3
PCCB-219ENST00000494742 HCN4Q9Y3Q4 1203 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms