RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 GRAMD1CQ8IYS0 662 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 CEP57L1Q8IYX8 460 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 CCDC102AQ96A19 550 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 ZNF577Q9BSK1 485 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 FUCA2Q9BTY2 467 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 MROH8Q9H579 483 aa23.21■■□□□ 1.31
KPNA1-210ENST00000494339 PCNTO95613 3336 aa23.2■■□□□ 1.31
KPNA1-210ENST00000494339 POTEB2H3BUK9 544 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 SLFN14P0C7P3 912 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 CCNA1P78396 465 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 RRAGBQ5VZM2 374 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 VSIG10LQ86VR7 867 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 SNX29Q8TEQ0 813 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 PYM1Q9BRP8 204 aaKnown RBP23.2■■□□□ 1.3
KPNA1-210ENST00000494339 JADE2Q9NQC1 790 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 KCNH7Q9NS40 1196 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 SPIRE1Q08AE8 756 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 MTMR1Q13613 665 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 LRCH2Q5VUJ6 765 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 KRT79Q5XKE5 535 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 SHCBP1Q8NEM2 672 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 SLC5A5Q92911 643 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 MMP19Q99542 508 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 NUDT12Q9BQG2 462 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 PKD2L1Q9P0L9 805 aa23.2■■□□□ 1.3
KPNA1-210ENST00000494339 ZNFX1Q9P2E3 1918 aaKnown RBP23.19■■□□□ 1.3
KPNA1-210ENST00000494339 ASTN1O14525 1302 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 PGK2P07205 417 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 BCRP11274 1271 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 PLCG1P19174 1290 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 AFMP43652 599 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 KCTD2Q14681 263 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 NCAPH2Q6IBW4 605 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 SASS6Q6UVJ0 657 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 NIPA1Q7RTP0 329 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 DNERQ8NFT8 737 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 CALML4Q96GE6 196 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 KIAA1468Q9P260 1216 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 MORF4L1Q9UBU8 362 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 USP25Q9UHP3 1055 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 VAV3Q9UKW4 847 aa23.19■■□□□ 1.3
KPNA1-210ENST00000494339 IPO5O00410 1097 aaKnown RBP23.18■■□□□ 1.3
KPNA1-210ENST00000494339 FSTL1Q12841 308 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 POSTNQ15063 836 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 KANK3Q6NY19 840 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 XRRA1Q6P2D8 792 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 PDXDC2PQ6P474 469 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 HOOK1Q9UJC3 728 aaKnown RBP23.18■■□□□ 1.3
KPNA1-210ENST00000494339 KIAA1217Q5T5P2 1943 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 GAS7O60861 476 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 PSMD10O75832 226 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 PRR29P0C7W0 189 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 FCER1AP12319 257 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 ALDH5A1P51649 535 aaPredicted RBP23.18■■□□□ 1.3
KPNA1-210ENST00000494339 MDM2Q00987 491 aaPredicted RBP23.18■■□□□ 1.3
KPNA1-210ENST00000494339 TYRO3Q06418 890 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 TAF1CQ15572 869 aaPredicted RBP23.18■■□□□ 1.3
KPNA1-210ENST00000494339 NAALADL2Q58DX5 795 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.18■■□□□ 1.3
KPNA1-210ENST00000494339 IFNL1Q8IU54 200 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 FAM133AQ8N9E0 248 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 STAMQ92783 540 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 PAGE5Q96GU1 130 aa23.18■■□□□ 1.3
KPNA1-210ENST00000494339 A0A087WWV3 80 aa23.17■■□□□ 1.3
KPNA1-210ENST00000494339 SOWAHBA6NEL2 793 aa23.17■■□□□ 1.3
KPNA1-210ENST00000494339 ELOA2Q8IYF1 753 aaPredicted RBP23.17■■□□□ 1.3
KPNA1-210ENST00000494339 LRRC15Q8TF66 581 aa23.17■■□□□ 1.3
KPNA1-210ENST00000494339 CCDC34Q96HJ3 373 aa23.17■■□□□ 1.3
KPNA1-210ENST00000494339 CDK5RAP3Q96JB5 506 aa23.17■■□□□ 1.3
KPNA1-210ENST00000494339 HHIPL1Q96JK4 782 aa23.17■■□□□ 1.3
KPNA1-210ENST00000494339 ZIC5Q96T25 663 aa23.17■■□□□ 1.3
KPNA1-210ENST00000494339 GRB10Q13322 594 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 FAM110CQ1W6H9 321 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 CYP4F22Q6NT55 531 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 OTOP1Q7RTM1 612 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 IWS1Q96ST2 819 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 AGO4Q9HCK5 861 aaKnown RBP23.16■■□□□ 1.3
KPNA1-210ENST00000494339 ADD3Q9UEY8 706 aaKnown RBP23.16■■□□□ 1.3
KPNA1-210ENST00000494339 CPA4Q9UI42 421 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 DDX39AO00148 427 aaKnown RBP23.16■■□□□ 1.3
KPNA1-210ENST00000494339 CHMP2AO43633 222 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 CCT6AP40227 531 aaKnown RBP23.16■■□□□ 1.3
KPNA1-210ENST00000494339 INHBEP58166 350 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 ANP32BQ92688 251 aaKnown RBP23.16■■□□□ 1.3
KPNA1-210ENST00000494339 PNMA5Q96PV4 448 aa23.16■■□□□ 1.3
KPNA1-210ENST00000494339 PLXNB2O15031 1838 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 BIN1O00499 593 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 CASP1P29466 404 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 SREBF2Q12772 1141 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 ECM1Q16610 540 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 SH3RF1Q7Z6J0 888 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 INPP4AQ96PE3 977 aaPredicted RBP23.15■■□□□ 1.3
KPNA1-210ENST00000494339 MTRQ99707 1265 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 TEKT3Q9BXF9 490 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 ZCCHC17Q9NP64 241 aaKnown RBP23.15■■□□□ 1.3
KPNA1-210ENST00000494339 PCDHA5Q9Y5H7 936 aa23.15■■□□□ 1.3
KPNA1-210ENST00000494339 DNAJC25-GNG10A0A024R161 153 aa23.14■■□□□ 1.3
KPNA1-210ENST00000494339 EML1O00423 815 aa23.14■■□□□ 1.3
KPNA1-210ENST00000494339 RGS20O76081 388 aa23.14■■□□□ 1.3
KPNA1-210ENST00000494339 ITGB3BPQ13352 177 aaPredicted RBP23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms